| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0592 |
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| Symbol | |
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| ID | 6408242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 644762 |
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| End bp | 646429 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710505 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001989627 |
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| Protein GI | 192289022 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.684564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACG CCGCCATCGC CGACAGCTAC GGCGCCGTCA CCCATGAGGT GATCAACCAG
CCGGTCGAAC TCGCCGACTA CAATCTGTTC AGCGCCGACC GGCCGCTGGT CGAGGCGGTG
ACGCGCGAGG GCGCCGAATG GGCCGCCAAC GACATTGCCG ATTTCGGCGC CCGGATCGGC
ACCGCCGAGT ATCTCGAACT CGGCGCGCTC GCCAACCGGC ATCTGCCGGA ATTCGACACC
CATGATCGCT ACGGCCGCCG CACCGATCTG GTGCGCTTCC ATCCGGCCTA TCACCGGCTG
ATGCAGACCT CGATCGAGAA TGGGCTGCAC TCTTCGCCGT GGACCGATCC GCGCAAGGGC
GCGCACGTCG CCCGCGCCGC ACGGTTCTAT CTGCACAGCC AGATCGAGGC CGGCCACGGC
TGCCCGATCA GCATGACGTT CGCGGCGGTG CCGTGCATCA GCCTGCAGCC GGACGTCGCC
AAGGTGTGGC TTCCGAAGGT CCTGGCGCGC AGCTACGACG CGCGCAACGT GCCGGCCGAG
CAGAAGCAGG GCATTACCAT CGGTATGGCG ATGACCGAGA AACAGGGCGG CTCGGATGTC
CGGGCCAACA CCACCCGGGC GATCCCGATC GGCGCCGGCG GACCGGGCGG CGAATACGAA
CTGGTCGGCC ACAAGTTCTT CGTCTCGGCG CCGATGTGCG ACGCTTTCCT GGTGCTGGCG
CAGGCGCCCG GCGGGCTGTC GTGCTTCCTG GTGCCGCGCT GGAAGCCGGA CGGCGCCAAG
AACCCGCTGC AGGTGCTGCG GCTGAAGAAG AAGATGGGCA ACGCCTCGAA CGCCTCGAGC
GAGACCGAGC TGCGCGGCGC GTTCGGCTGG ATGATCGGGC CGGAAGGCCG CGGCGTCGCC
ACCATCATCG AGATGGTGGC GATGACAAGG TTCGACTGCA TGATCGGCTC GTCCGCGATC
ATGCGCGCGG CGCTGTCGCA GGCGATGGAT CATTGCCGCC AGCGTGCCGC GTTCGGCCGG
CTGCTGATCG AGCAGCCGAT CATGCAGAAC GTGCTGGCGG ATCTCGCGAT TGAAACCGAA
GCGGCGCTGG CGCTGACGAT GCGGATCGCC CGCGCGCTCG ACCATCGCAC CGACGAACAT
GAGGCGCATC TGATCCGGAT CGGATCGGCG ATCGGCAAGT ACTGGATCTG CAAGCGCACG
CCCAGTCTCA CCGCCGAGGC GATGGAGTGC ATCGGCGGCT CCGGCGTGAT GGAAGACGGG
CCGATGCCGC GTCACTTCCG CGAAAGCCCG GTCAATGCGA TCTGGGAAGG TTCGGGCAAC
GTGCAGTGCC TCGACGTGCT GCGGGCGATG ACGCGCGCGC CGGAAACGCT GCAGGCGTAT
TTTGCCGAGG TCGAGCAGGC CAAAGGCGCC GACGTGGCGT TCGATCGCCA CATCGCCGCC
CTGAAGGACG ACATGCGTGA CGCGTCCGAC TTCGAAGAGC GTGCCCGCGA CCTGGTCGAT
CGTTTGGCCG TTGGGCTGCA GGCCAGTGTG CTGATCCGGC ATGCGCCTGA CGAGGTCGCC
GAGGCATACT GCGCCTCGCG GCTGGCGCAG CGCGGCGCGC ATCATTACGG CGCGCTACCC
AAGGGCGTGA ACTTCGCCGC GATCATCGAC CGCGCCCGGC CGCGGTAA
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| Protein sequence | MLNAAIADSY GAVTHEVINQ PVELADYNLF SADRPLVEAV TREGAEWAAN DIADFGARIG
TAEYLELGAL ANRHLPEFDT HDRYGRRTDL VRFHPAYHRL MQTSIENGLH SSPWTDPRKG
AHVARAARFY LHSQIEAGHG CPISMTFAAV PCISLQPDVA KVWLPKVLAR SYDARNVPAE
QKQGITIGMA MTEKQGGSDV RANTTRAIPI GAGGPGGEYE LVGHKFFVSA PMCDAFLVLA
QAPGGLSCFL VPRWKPDGAK NPLQVLRLKK KMGNASNASS ETELRGAFGW MIGPEGRGVA
TIIEMVAMTR FDCMIGSSAI MRAALSQAMD HCRQRAAFGR LLIEQPIMQN VLADLAIETE
AALALTMRIA RALDHRTDEH EAHLIRIGSA IGKYWICKRT PSLTAEAMEC IGGSGVMEDG
PMPRHFRESP VNAIWEGSGN VQCLDVLRAM TRAPETLQAY FAEVEQAKGA DVAFDRHIAA
LKDDMRDASD FEERARDLVD RLAVGLQASV LIRHAPDEVA EAYCASRLAQ RGAHHYGALP
KGVNFAAIID RARPR
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