Gene Rpal_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0572 
Symbol 
ID6408222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp621032 
End bp622150 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID642710485 
Productvon Willebrand factor type A 
Protein accessionYP_001989607 
Protein GI192289002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA TCACCTTCCA AACTGCGCTG ACCTTGGCGG CGCTGGCGCT TCCACTCTCC 
TTCGCGACGG CCGCGCAGGC GCGTCCGTCG GTCGAAGTCG CATTCGTGCT CGACACCACC
GGCTCGATGA GCGGCCTGAT CGAAGGCGCC AAGCGCAAGA TCTGGTCGAT CGCCACCACG
ATCCTCGACG ACAATCCCGA CGCCGACATC CGGATGGGGC TGGTCGCCTA TCGGGACATC
GGCGACGACT ACGTGGTCCG CAGCGTCGAT CTCACGACCG ATATCCAGGA CCTCTACGGC
CAACTCCTGC AACTGCAGGC GCGCGGCGGC GGCGACTGGC CCGAGAGCGT CAACGAGGCA
CTCGATACGG CGATCAACAA GCTGCATTGG CGGCAGGGCG GCGACACCCG CCGCATCGTA
TTCCTGGTCG GCGATGCTCC GCCGCATATG GACTACGCGC AGGATACCAA ATACCCGGAG
ACCCTGGCGG TCGCCCGGCA GAAAGACATC ATCGTCAACG CGGTGCAGGC GGGCGACGCA
CGCGACACCG CGCGGGTGTG GCATGAAATC GCTGACGGCG GCCGTGGCCG CTATATTCCG
ATCCCGCAGG ATGGCGGGCA GATCGTGGTG ATCCAGACGC CGTACGACGA CGACATCATC
ATCCTGCAGA AACAGATCAA CGGCACCGTG ATCCCCTACG GCCCGGCGCC GATGCAGCGG
CGGACCGAAG AGAAGACCGG ACAACTCGCC AAGGTCGCAG CCTCGGCACC GGCGTCGGCG
TCAGACATGG CCAGCTACAT CAACAAGCGC GCCCGCAGTT CGTCCGAGGC CGTCACCGGC
GGAGGCGACC TGGTCAGCGA CGTGCAGGCC GGTCGACAGA AGCTCGACCA GGTCAAGGAG
GAGGATCTGC CGCCCGAGCT GCGCGCGCTG CCGGCCGAAC AACGTGCCGC CAAGCTCGAC
GCGCAGATGA CGGCCCGCAA GGCGCTCAAC GACAAACTCG CGGCCCTGGT CAAGCAGCGC
GATGCCTATC TGCTGGCCCA GCGCGACAAG CAGCCGAAGC AGGCCTCGTC GTTCGACCGC
GAGGTCGAGG CGACCCTGAA GGCGCAGCTG AAGCGATAA
 
Protein sequence
MKRITFQTAL TLAALALPLS FATAAQARPS VEVAFVLDTT GSMSGLIEGA KRKIWSIATT 
ILDDNPDADI RMGLVAYRDI GDDYVVRSVD LTTDIQDLYG QLLQLQARGG GDWPESVNEA
LDTAINKLHW RQGGDTRRIV FLVGDAPPHM DYAQDTKYPE TLAVARQKDI IVNAVQAGDA
RDTARVWHEI ADGGRGRYIP IPQDGGQIVV IQTPYDDDII ILQKQINGTV IPYGPAPMQR
RTEEKTGQLA KVAASAPASA SDMASYINKR ARSSSEAVTG GGDLVSDVQA GRQKLDQVKE
EDLPPELRAL PAEQRAAKLD AQMTARKALN DKLAALVKQR DAYLLAQRDK QPKQASSFDR
EVEATLKAQL KR