Gene Rpal_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0557 
Symbol 
ID6408207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp606349 
End bp606969 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID642710470 
ProductMethyltransferase type 11 
Protein accessionYP_001989592 
Protein GI192288987 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGGTT TTCTTCTTTT GCTGTTGCCG CCAGCCCTCT GGATCGGCTG GCGGATGGCG 
TCCAGGCGGA CGGTGTTGCC TTGTCCCTCG GAGATCGCCT GGCTGGTGGA GATGGAAAAC 
CCGCTGGCGC GCGCCACGCG GTCCGAACAG GTCGTGGCGC AATTGCAGCC GCGACCGGGC 
GACCATGCGA TCGACATCGG TTGCGGCCCC GGGCGCGTGA CGCTCCCGCT GGCGCGGGCC 
GTTGGGCCAA ACGGCCAGGT GACCGCGCTC GACGTCCAGG ACGGCATGCT GGCGAAGGTT 
GCGGCCAAGG CTGCAGCCGA AGCGCTGACC AATATCCGCC TGCTCCGAGC CGACGTGCGG 
GAAGCGTCCG TCCCTTCAGG CTCGCTCGAT GCCGCCGTGA TGGTGATGGC ACTCGGCGAA 
TTTCCGAGCG GCACCGAGAT CTTTCCCTCG GTGCATCGCA TGCTGCGACC CGGCGGCCGG 
CTGCTGATCG CCGAAAGCGT GTTCGATCCG CACTACGTCT CCCGCCGCCA CGTGCGGGAG 
CGGGTCTCGG CCGCGGGATT TCGGGAGCTG CGCTGCGTCG GCAACGCTTT CGGCTACAGC 
GTCACGTTCG AACGGACGTA G
 
Protein sequence
MSGFLLLLLP PALWIGWRMA SRRTVLPCPS EIAWLVEMEN PLARATRSEQ VVAQLQPRPG 
DHAIDIGCGP GRVTLPLARA VGPNGQVTAL DVQDGMLAKV AAKAAAEALT NIRLLRADVR 
EASVPSGSLD AAVMVMALGE FPSGTEIFPS VHRMLRPGGR LLIAESVFDP HYVSRRHVRE 
RVSAAGFREL RCVGNAFGYS VTFERT