| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0488 |
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| Symbol | |
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| ID | 6408137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 527007 |
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| End bp | 528524 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710400 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001989523 |
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| Protein GI | 192288918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4784] Putative Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.54801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGTC GCGTGAATTG GGGTGCAGCA CGGCGCAACT TCCGAAAGGG CCGCCGCCAG
GTGGCGGCGT GGCTGCTGCT GGGTGCTGCC CTGACGCTGG CCGGCTGCGG CGATCCCAGT
CGGTTCGAGA CCGGGCCGGT CACCGCCGCG CCGTCCGCCA AGCCGGTGCG CCCGCCGGTG
CAGTCGCAGG CGGCGGAGCG CGAGCACGAG CGCATCCTGG CGACCTATGG GGGCGCCTAT
GACGATCCCA AGCTCGAAGC GCTGATTTCC GGCATCGTCG ACCGGCTGGT CGCCGCGTCG
GATAGGCCGG ATCTGACCTA CAAGGTGACG ATCCTCAATT CCGGCGCCGT CAACGCCTTC
GCGCTGCCGA CCGGCCAGCT CTACGTCACC CGCGGCCTGA TTGCGCTTGC CACCGACACG
TCCGAACTGT CGTCGGTGCT GTCGCACGAG ATGGCTCATG TGCTCGCCAA ACACGCCGCT
ATCCGGGAGG ACCAGGCGCG GCAGGCGGCA CTGGTCGCCC GCGTCGTCAC CGACATGGGC
AACGATCCCA GCATGACCGC GCTGGCGCTC GCCAAGACCA AGCTGTCGAT GGCGAGCTTC
TCGCGGCAGC AGGAGCTCGA GGCTGACGGC ATCGGCATCG GGATCTCGGC GCGTGCTCAG
TTCGATCCCT ACGGCGCGGC GCGCTTCCTC ACCGCGATGG AGCGCAACGC GGCGCTCAAG
GCCAATCGTG GCACCGGCGA CAGCCGCACC GACTTTCTGT CGTCCCATCC GGCGACTCCG
GAGCGTGTCA GCAACGCCCA GAACAACGCC CGGCAGTACA CCGCTCCGCA GGGCGGCTGG
CGCGGCGAAC GCGGCGAGCG TGACCGCGAG GCCTATCTCA ATGCTATCGA CAACATCGTC
TATGGCGAGG ACCCGAGCGA AGGCTTCGTC CGCGGCCGCC GCTTCCTGCA TCCCAAGCTC
GGCTTCACTT TCCAGGTGCC GGACTCGTTC ACGCTCGACA ACACGGCGCA GGCGGTGATC
GGGCTGCGAG AAGGCGGCAA TCAGGCGATG CGATTCGACG TCGTCCGGGT GCCGGCGGAG
CAGTCGCTCG CCGACTATCT GAATTCCGGC TGGATGGAGA ACGTCGACAA GAGCTCCACC
GAGGAGCTGA CCGTCAACGG CTTCCCGACC GCGTCGGTGA CGGCGCGCGG CGAGCAGTGG
CAGTTCAGGG TGTATGCGTT GCGGTTCGGC AGCGACGTCT ATCGCTTCAT CTTCGCGACC
CGGCAGCGCA CCGCCGAGAG TGACCGCAAC GCCCGCGAGA CGGTGAATTC GTTCCGGCGG
CTGTCGCTCG ACGAAATCCA AGCGGCGCGT CCGCTGCGCA TCAAGGTGAT CAGCGTGCAG
CCCGGCGACA CCGTCGAATC TCTGTCGCAC CGGATGTCCG GCGTCGATCG GCCACTGGAG
CGCTTCCGTG TTCTCAACGG TCTCGACGCC CACGCCCAGG TCAAGCCGCG CGAGCTGGTG
AAGATCGTCA TCGACTGA
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| Protein sequence | MSSRVNWGAA RRNFRKGRRQ VAAWLLLGAA LTLAGCGDPS RFETGPVTAA PSAKPVRPPV
QSQAAEREHE RILATYGGAY DDPKLEALIS GIVDRLVAAS DRPDLTYKVT ILNSGAVNAF
ALPTGQLYVT RGLIALATDT SELSSVLSHE MAHVLAKHAA IREDQARQAA LVARVVTDMG
NDPSMTALAL AKTKLSMASF SRQQELEADG IGIGISARAQ FDPYGAARFL TAMERNAALK
ANRGTGDSRT DFLSSHPATP ERVSNAQNNA RQYTAPQGGW RGERGERDRE AYLNAIDNIV
YGEDPSEGFV RGRRFLHPKL GFTFQVPDSF TLDNTAQAVI GLREGGNQAM RFDVVRVPAE
QSLADYLNSG WMENVDKSST EELTVNGFPT ASVTARGEQW QFRVYALRFG SDVYRFIFAT
RQRTAESDRN ARETVNSFRR LSLDEIQAAR PLRIKVISVQ PGDTVESLSH RMSGVDRPLE
RFRVLNGLDA HAQVKPRELV KIVID
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