| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0483 |
|---|
| Symbol | |
|---|
| ID | 6408132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 521968 |
|---|
| End bp | 522774 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642710395 |
|---|
| Product | Enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001989518 |
|---|
| Protein GI | 192288913 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.357471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCT ACACCGATAT CGCGGTCGAC AAGACCGGCC ACGTCGCCAC CATCGAAATC
CAGCGGCCGC CGCTGAACTT CTTCGACATC TCGCTGATCC GGCAGATCGC CAATGCGCTC
GACGAGATCG ACGCCGATCC GCCGATCCGC GCCACCGTGC TGGCGGCACA GGGCAAGGCG
TTCTGCGCCG GCGCTAATTT CGGCGATCCG GCCCGGCAGG AAGCGGATCC GGCGGTTGCG
AAGGGCGATC CGGCCGACAG CCTCGGCGAG ATCGGTCATC TGTACTACGA GGCGGTACGG
ATCTTCCGCG CCAAGAAGCC GATCATCGCG GCGGTGCACG GCGCCGCGAT CGGCGGCGGA
CTGGGCCTCG CGGTGTCGGC GGACTTCCGC GTCACCTGCG CCGAAGCACG ATTCTCCGCC
AATTTCACTA AACTCGGCTT CCATCCCGGT TTCGGCCTCA CCGTGACGCT GCCGGAGCTG
ATCGGCAAGA ACAACGCCGA GCTGATGTTC TACACCTCGC GCCGCGTCAC CGGCGAAGAG
GCGGTGCAGA TGGGCCTCGC CAACGTGCTG GTGCCGATCA ACGAAGTGCG CAGCGGTGCG
CTGAAGCTGG CGCGCGAGAT CGCCGAATGT TCGCCGCTCG GTCTTCTGTC GACCCGCGCC
ACCATGCGCG CGAGCCTGGC CGACCGGGTG ATGGAGGCCA CCAAGCACGA ACTCGCCGAA
CAAACTCGCC TGCGCGCTAC CGAAGACTTC AAGGAAGGCG TCAAAGCCAC CGAAGAACGC
CGCGTTGCGC ATTTCAAGGG GCGGTAG
|
|---|
| Protein sequence | MSSYTDIAVD KTGHVATIEI QRPPLNFFDI SLIRQIANAL DEIDADPPIR ATVLAAQGKA
FCAGANFGDP ARQEADPAVA KGDPADSLGE IGHLYYEAVR IFRAKKPIIA AVHGAAIGGG
LGLAVSADFR VTCAEARFSA NFTKLGFHPG FGLTVTLPEL IGKNNAELMF YTSRRVTGEE
AVQMGLANVL VPINEVRSGA LKLAREIAEC SPLGLLSTRA TMRASLADRV MEATKHELAE
QTRLRATEDF KEGVKATEER RVAHFKGR
|
|---|
| |