| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0438 |
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| Symbol | truB |
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| ID | 6408086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 471506 |
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| End bp | 472606 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710350 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001989474 |
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| Protein GI | 192288869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGA CCACCCCCGA CGCCCTGCTC GCCCCGCACG ACGTGCAGCA CGCCGGCGCC
GACGAATCCG CCGCGCAGAT CCGTAAGCCG CGCGACAACA AGGACCCGCG CAATGCCAAT
CGCGGCGGCG GCAATGGCAA GCCGCGCCGC GACAAGCGCG ACGTCCACGG CTGGGTGGTG
CTGGACAAGC CGATCGGCAT GACCTCGACC CAGGCGGTCG CGGTGCTGAA GCGGCTGTTC
TCGGCCAAGC GCGCCGGCCA TGCCGGTACC CTCGATCCGC TGGCCTCCGG CGGCCTGCCG
ATCGCGATGG GCGAAGCCAC CAAGACGGTG CCGTTCGTGA TGGACGGCCG CAAGCGCTAC
CGCTTCACCG TGGCTTGGGG CGAGGAACGG GATACCGACG ACACCGAGGG CCGCGCGGTC
GCGACCAGCC CGGATCGGCC GACCGCCGAG GCGATCAGGG CGCTGCTGCC GCGCTTTACC
GGCGTGATCG AGCAGGTTCC GCCGCAATAC TCGGCCGTGA AGATCCAGGG CGAGCGCGCC
TACGACCTGG CACGCGACGG CGAGGTCGTG CCGCTGGTCC CGCGTCCGGT CGAGATTCAC
GAATTAACCC TTGTGGAACA TGGAGATGAC GGCCGCTCGG TGTTCGAGGC CGAGTGCGGC
AAGGGAACCT ATGTGCGGGC GCTCGCCCGT GACATGGGCC GGCTGCTCGG CTGCTACGGT
CATATCTGCG CGCTGCGCCG CACCGTGGTG GGGCCGTTCG ACGAGTCGGA CATGATTCCG
CTGGAAGAAC TACAGGCTTT GTGCGATAGA GCGGCGTCCG GCGAGGGTAG CCTCGCCGAC
GCGCTACTGC CCGTTGAGAC CGCGCTGGAC GACATCCCGG CACTGGCCGT CACTCGGGCT
GATGCGGCAA GGCTCCATCG GGGCCAGGCC GTTTTGTTGC GCGGACGGGA TGCGCCTCAT
TGTAGCGGCA CAGTCTATGT CACGGTGGCA GGCCGGCTTC TGGCCCTCGC CGAAGTCGGC
AATGGCGAGC TCATCCCCAA GCGCGTGTTC AACCTCACCG GGCTGACTGC CAGCTCGGCC
GTTCGCAAGG AAAGTATCTG A
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| Protein sequence | MTVTTPDALL APHDVQHAGA DESAAQIRKP RDNKDPRNAN RGGGNGKPRR DKRDVHGWVV
LDKPIGMTST QAVAVLKRLF SAKRAGHAGT LDPLASGGLP IAMGEATKTV PFVMDGRKRY
RFTVAWGEER DTDDTEGRAV ATSPDRPTAE AIRALLPRFT GVIEQVPPQY SAVKIQGERA
YDLARDGEVV PLVPRPVEIH ELTLVEHGDD GRSVFEAECG KGTYVRALAR DMGRLLGCYG
HICALRRTVV GPFDESDMIP LEELQALCDR AASGEGSLAD ALLPVETALD DIPALAVTRA
DAARLHRGQA VLLRGRDAPH CSGTVYVTVA GRLLALAEVG NGELIPKRVF NLTGLTASSA
VRKESI
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