Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0424 |
Symbol | |
ID | 6408072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 454807 |
End bp | 455334 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642710336 |
Product | protein of unknown function DUF1332 |
Protein accession | YP_001989460 |
Protein GI | 192288855 |
COG category | [S] Function unknown |
COG ID | [COG4103] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGATA AACTGCGCCA ATTCATCACC GATGTCGTCG CCCCGAGCGC CCCGGATGAG CTGATGCTCG ACGACGGCGG CTACCGCCTC GCCGCCACGG CGCTGCTGAT CCATGTGATT TCGATCGATG GCGATCCGTC GGAAGTCGAA AAGCAAAAGC TGCATTCATT GCTCGAACAG CGCTTCGGTC TCGATGCCGC AACCGCCACC CGGCTGATCG CCTCGGCGAC ACTGGTCGAA GGCGAGGCCG TTGACCTTTA TCATTTCACG AGCGTGATCA TGCGTTCGGT GAATGAGCAG GGCCGGCTGC GGATCGTCGA AATGATGTGG GAGCTGGTGT ACGCTGACGG CACCGTCACG GAGTTTGAAG AGAACGTGGT GTGGCGCGCA GCCGATCTGT TGGCGATCTC GACCCGCGAC CGCGTCACCC TGCGCCAGAA GGTAGCTGCC GCAGCTCCCG TTGCGCCCGG TGCCGCCCAG GGCGGTACGG CGATGGGGAG TGTCGCCGAG GTCGATCCCG CCAACTAA
|
Protein sequence | MLDKLRQFIT DVVAPSAPDE LMLDDGGYRL AATALLIHVI SIDGDPSEVE KQKLHSLLEQ RFGLDAATAT RLIASATLVE GEAVDLYHFT SVIMRSVNEQ GRLRIVEMMW ELVYADGTVT EFEENVVWRA ADLLAISTRD RVTLRQKVAA AAPVAPGAAQ GGTAMGSVAE VDPAN
|
| |