Gene Rpal_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0421 
Symbol 
ID6408069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp452323 
End bp452823 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID642710333 
Productprotein of unknown function DUF1486 
Protein accessionYP_001989457 
Protein GI192288852 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.378501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCG AGGAGTTCGC GCGGCTGCTG GAGAGCCTGA CCCGCGCGGC GGAATCCGGC 
GACGGCGCAC GGTTCGCCGG CCATTTCACC GAAGACGCGA CGTATCACGA CTACATCTAC 
GGCCCGCACA TCGGCCGCGC CGAGATCGCC ACGATGATGC AGGATCTGTT TCATCGCGAC 
GCCGCCGATT ATCGCTGGGA GATGTTCGAC CCGGTCTGCA ACGGCGACCT CGGCTACGCT 
TGGTCGTTGT CTAGCTTCAC CTCCACCGTT CCCGAGTTCA AAGGCCAGCG CGTGGTGATC 
GACGGCATGA GCCGGTTCAT CCTGCGCGGC GAGCTGATCG CGGAGTATCG CGAGTCGGTC 
AATGGCGGCG TGGCAATGGC GCAGCTCGGC GTCGCGCCCG AGCGGATGGC GAAGGTCTTC 
CGCAAATGGA GCGGCTGGCT GCAGCATCGC CCCGAAACCC AGGACTATCT GGCCCGGCCC 
AAAGGCACGC GCCGCACCTG A
 
Protein sequence
MTSEEFARLL ESLTRAAESG DGARFAGHFT EDATYHDYIY GPHIGRAEIA TMMQDLFHRD 
AADYRWEMFD PVCNGDLGYA WSLSSFTSTV PEFKGQRVVI DGMSRFILRG ELIAEYRESV 
NGGVAMAQLG VAPERMAKVF RKWSGWLQHR PETQDYLARP KGTRRT