| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0350 |
|---|
| Symbol | aceK |
|---|
| ID | 6407996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 369262 |
|---|
| End bp | 371094 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642710260 |
|---|
| Product | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
|---|
| Protein accession | YP_001989386 |
|---|
| Protein GI | 192288781 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4579] Isocitrate dehydrogenase kinase/phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.515811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CTGCTTCCCA CACCCGCGCC AGGCCGCTCG GTGCCTCCGA GATCGAACAC
GCCACGCGGA TCGCCGAGCC CGACTTCGAC CTGCTCGACG CGCTGTACCG CACCGACGAT
CCCGACGATC AGGCGCGCCT GCTGGCGCGC GTGGTGCTGT CGGCCTTCGA TAACTATTAC
GCGGTGTCGC GGCGAATTCC GGCGCTGGCT CAGGCGGCGT TCGAGGCGCG CGACTGGCCG
GTGACGGTGC GGCTGTCGAA GATCCGGATC GGGCTGTACA CGGCCTGCAT CGACCAGCTG
GTGCCGCTGC TGAAAGCCGG GCTGCCGGAG CTGACGACCG ACGAACAGCT CTGGCCGACC
GCCGAGGCCG AACTGCTGGC CGCGATCGAG GGCCGCTACG AGGCCGATTT CGCCTTCGCG
TTCTGGCAGT CGCTGCGCCG CAAGCTGGTC AGCGACGAAT GGCGGCCGGT GTCCTATGAC
GCCGGCTCCA CCGCACGTCG CACAACATCG CCCGCAGCGG TGCTGAAGAC GACCACCACC
ACGCTGCCGA TCACCGCCGA GGTGATCGCC GGGATTCTTG GCGACGCCGG CTTCCGCGTG
CCGTGGCGGG ATCGCGACGG CGACGCGGCG CTCGCCGCGC AGGCGATCGA GACGGCGCTG
GAGCCGCTCA GCCCGCGGCC CGGCGAACCG GTCAAAATCG AGATCGCCGA CGCCGGCTTC
TTCCGCAATC GCGGCGCCTG CCTGGTCGGC CGGATCCAAC TGCGCGATCG CGGCGACATG
CCGATGCGCA ACCTGCCGCT GCTGATCGCG CTGCTCAACG AGAAGGACGG GCTGGTCGTC
GACGCTGTGC TGACCGACAG CGACGAGCTG CAATACGCAT TCTCCTCGAC GCTGGCAAAC
TATCACGCCA CCAATCCGCG CTATCATGAA CTGGCCCGGC TGCTTTACGA GCTGATGCCG
AAGCGGCCGC TCGGCACGCA GTACTCGTGC ATCGGCTTCC ATCACCTCGG CAAGGTCGCG
GTGATGAGCG AGATCCTGGC GGAACATCGC AAGACAAAGG AGAGACTCGC CACCGCGCCA
GGCTTCAAGG GAACGGTCGC GATCGCCTTC ACGATGCCAT CGTCGGCCTA TGTGCTGAAG
ATCATCCGCG ACCATCCGAC CGACGACTAC AAGTTCGATT ACTTCGACGG CCTCGACGAG
GTGTTGCGCA AATACAACCT GGTGCACGAG ATCGACCGCG CCGGCTCGAT GCTCGACAAC
ATCATCTATT CCAACGTCAA GCTCGACCGC GCGATGTTCG CGCCGGAGCT GCTCGATGAA
CTGCTGGAAG CAGGGATCGG AACGGTGACG CTCGATCGCG GCGCGCTGGT GTTCCGGCAT
CTGATCGTGC AGATCAAACT GACGCCGCTC CCGCTGTATC TCGCCAACGC ATCCGCAGCC
GAATCCCGCG CCGCGGTGAT CAATCTCGGC GATTGCATCA AGAACAACGC CGCGGCCGAT
ATCTTCAACA AAGATCTCGA CGGCCGCAAT TACGGCGTCA GCCGAATCCG CAAAGTCTAT
CTGTTCGACT ACGACGCAGT GGAGCCGCTG ACCTCGGTCA CCGTGAGCCG TGACGGTGCG
GCGCCGGGTG AATTCGACAA TGGCATGGTG TTCAGGCCGC AGGAGATGCT GGAGGGGCTG
CGGATCGACG ACCCCGGCCT GCGCCGCGCC TTCCGCGATG CGCATCCCGA ACTGATGCAG
GCCGATTATT GGGAAGGCAT GCAGCGCGCG CTTCGCGACG GCAAGGTGCC GAAGGTGATG
AATTATCCGG CGTCGCGGCG GCTGCAACGG TAG
|
|---|
| Protein sequence | MTATASHTRA RPLGASEIEH ATRIAEPDFD LLDALYRTDD PDDQARLLAR VVLSAFDNYY
AVSRRIPALA QAAFEARDWP VTVRLSKIRI GLYTACIDQL VPLLKAGLPE LTTDEQLWPT
AEAELLAAIE GRYEADFAFA FWQSLRRKLV SDEWRPVSYD AGSTARRTTS PAAVLKTTTT
TLPITAEVIA GILGDAGFRV PWRDRDGDAA LAAQAIETAL EPLSPRPGEP VKIEIADAGF
FRNRGACLVG RIQLRDRGDM PMRNLPLLIA LLNEKDGLVV DAVLTDSDEL QYAFSSTLAN
YHATNPRYHE LARLLYELMP KRPLGTQYSC IGFHHLGKVA VMSEILAEHR KTKERLATAP
GFKGTVAIAF TMPSSAYVLK IIRDHPTDDY KFDYFDGLDE VLRKYNLVHE IDRAGSMLDN
IIYSNVKLDR AMFAPELLDE LLEAGIGTVT LDRGALVFRH LIVQIKLTPL PLYLANASAA
ESRAAVINLG DCIKNNAAAD IFNKDLDGRN YGVSRIRKVY LFDYDAVEPL TSVTVSRDGA
APGEFDNGMV FRPQEMLEGL RIDDPGLRRA FRDAHPELMQ ADYWEGMQRA LRDGKVPKVM
NYPASRRLQR
|
|---|
| |