| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0327 |
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| Symbol | |
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| ID | 6407973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 346656 |
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| End bp | 347855 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642710237 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001989363 |
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| Protein GI | 192288758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.19118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCT TGCACGATCC ACACACGAAA CCGTTGCGAA CCACCCGCCG TACCGCGCTG
GGGCTGCTCC TCGGAGCGCC ACTGCTGAGC GCCTGCTCGG GCGTCCAGCA AAGCCTGAGC
GATCAGTTCG GCCAGCAACA GCCCGCCGCC GGTCCGGCGC AGCAGCCGGC AGCGGTCGGC
AACGGCCGGG TCAAGGTCGG GCTGGTGCTG CCGTTGTCGG CGCCGGGCAA CGCCGGGCTC
GCCGCGCAGT CGATGAAGAA CGCCGCCGAA ATGGCGCTCG CCGAATTCCG CAATCCGGAC
GTTCAGCTCC TGATCAAGGA CGACGCCGGC AATCCGACGG GGGCGCAGAC TGCGACCCAG
CAGGCGCTGG ACGAAGGCGC CGAGATCATT CTCGGGCCGC TGTTCGCTCA ATCGGTGCCG
GCTGCGGCGC AGGCGGCCCG CGCCCGCGGC GTGTCGGTGA TCGCGTTCTC GACCGACTCC
AGCGTCGCCG GCCGCGGCGT GTTTCTGCTG AGTTTCCTGC CGGAGTCCGA CGTCAACCGC
ATCATCGGCT ATGCCGGCAG CATCGGAAAG CGATCCTACG CGGCGCTGCT CCCCGAGAAT
GCCTACGGTG CGGTGGTCGA AGCCGCGTTC AAGCAGATCA CCAGCCAGAA GGGCGGCCGT
ATCGTCGCAT TCGAAAAATA CGGCGCCGAC CGTGCCGGTC CGGCGCGGAC CATTGCGGCC
TCTCTTGCGA GTGCCGATGC GTTGTTGCTC GCCGATGATG GTGATGCGCT GGCCGCGGTG
GCGGACGCGC TCGGTGCCGC CGGCGCGGAT CTGAAGCGGG TGCAGCTGCT CGGCACCGGC
CTGTGGGACA ATCCGCGGGT GTTCGCCACC CAGGCCCTGC AGGGCGGGTT GTTTGCGGCG
CCCGATCCGT CCGGCTTCCG CGCGTTCTCA GGCCGCTATC GCGCCCGCTA TGGGCAGGAC
CCGGTCCGCA CCGCGACGCT CGCTTATGAT GGTGTCGCGC TGGTGGCGGC GCTGGCCCGC
ACCCAGGGCC CGCAGCGGTT CTCGGCCGAA ACGCTGACCA ATCCGTCCGG TTTTGCCGGC
ATCGACGGGC TGTTCCGGTT CAGGGCCGAC GGCACCAATG AACGCGGCCT TGCGGTGATG
AAGGTCGCGA GCGGCGGTGC GCAGGCCGTC GCGGGCCCGC CGAAGAGCTT CGGCGCCTGA
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| Protein sequence | MASLHDPHTK PLRTTRRTAL GLLLGAPLLS ACSGVQQSLS DQFGQQQPAA GPAQQPAAVG
NGRVKVGLVL PLSAPGNAGL AAQSMKNAAE MALAEFRNPD VQLLIKDDAG NPTGAQTATQ
QALDEGAEII LGPLFAQSVP AAAQAARARG VSVIAFSTDS SVAGRGVFLL SFLPESDVNR
IIGYAGSIGK RSYAALLPEN AYGAVVEAAF KQITSQKGGR IVAFEKYGAD RAGPARTIAA
SLASADALLL ADDGDALAAV ADALGAAGAD LKRVQLLGTG LWDNPRVFAT QALQGGLFAA
PDPSGFRAFS GRYRARYGQD PVRTATLAYD GVALVAALAR TQGPQRFSAE TLTNPSGFAG
IDGLFRFRAD GTNERGLAVM KVASGGAQAV AGPPKSFGA
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