Gene Rpal_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0291 
Symbol 
ID6407937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp312242 
End bp312805 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID642710201 
Producthypothetical protein 
Protein accessionYP_001989327 
Protein GI192288722 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0935679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCGG CTAAGCCCGC GGAGCTCAAG AAGTTCGTCG TCCGGTTGGC GCTGGCGGTT 
GCGCTGGCCG CCCCGGTCGC CGGCTGCTTC CAACCGATGT ACGCCGATCG CGGCGACGGT 
TCGCCGACGC TGCGCGATAA GCTGAACGCC ATCGAAGTCC CGCCACTGGA TATTCCGAAC 
GGGTCGCGCA ATTCCCGCCT CGGCGTCGAG CTGCGCAACA AGCTGATGTT CAAGCTGTAC 
GGCAGCGCCA CCGGCGCGCC ACCGCTGTAC ACGCTGAAGA TCTCGATCTC GACCTCGCGG 
TCGTCGCTGA TCGTCGATCC CAGCACGCAG CTGCCGACGA TCGAAAACTA CGCGATCGAC 
GCCAGCTATC AGCTTAAGGA CATCGCCACC GGCAAGACCG TGGTGAGCGG CAACACTTTC 
TCGCGCGTCG AATACGACGT GCCCGGCCAA TCGCAGCGCT TCGCCCGCAC CCGCGCCGGC 
CGCGATGCGG AAGACCGCGC CGTGCAGGAG ATCGCCGAGA ACATCAACAC TCGGCTCGCC 
TCGTTCTTCT ACGCCGGGAT GTGA
 
Protein sequence
MSSAKPAELK KFVVRLALAV ALAAPVAGCF QPMYADRGDG SPTLRDKLNA IEVPPLDIPN 
GSRNSRLGVE LRNKLMFKLY GSATGAPPLY TLKISISTSR SSLIVDPSTQ LPTIENYAID 
ASYQLKDIAT GKTVVSGNTF SRVEYDVPGQ SQRFARTRAG RDAEDRAVQE IAENINTRLA 
SFFYAGM