| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0202 |
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| Symbol | |
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| ID | 6407846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 222436 |
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| End bp | 223170 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710110 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001989238 |
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| Protein GI | 192288633 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.375034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA CCGAACTCGC CAATCCGACC CGGTTCCTGA CGCTCGCGGG GCGCCTGCTG
CCCTGGCTGG CGGCCGCGAC CGCATTGGCG CTGGCGGCGG GACTGACCCA GGGCATGCTG
GCACCCGACG ACTACCAGCA AGGCGCCACC GTCAAGATCA TGTTCGTGCA CGTGCCGAAC
GCCTGGCTGG CGATGTTCGT GTGGGGGGTG ATGAGCGTCG CCTCGCTCGG CACGCTGGTG
TGGCGGCATC CGCTCGCCGA CGTCGCGGCC AAGACCGCCG CGCCGATCGG CGCGGCCTTC
ACCTTTCTCG CGCTGGTCAC CGGCTCGCTG TGGGGGCGGC CGATGTGGGG AACCTATTGG
GAATGGGACG CCCGGCTGAC CTCGATGCTG GTGCTGTTTC TGATGTATCT CGGACTGATC
GCGCTCTGGC GCGCAGTCGA GGACCCGTCC CGGGCCGCTC GCGCCGCCGC CGTGCTGACC
TTGGTCGGCG CCGTCAACCT GCCGATCATC AAGTTCTCGG TCGACTGGTG GAATACGCTG
CATCAGCCGG CCTCGGTGGT GCGGATGGGC GGATCGACGC TCGACAAGGC GTTCCTGATC
CCGCTGCTGG TCACCGCGAT CGGGTTTTCA CTGCTGTTTC TGACGCTGCA TCTAGCCGCG
ATGCGGAACG AGATCCTGCG CCGGCGGGTG CGTTCGCTGC AGATGATGCA GGCCAGCCGG
GCCGAGGCGG CGTGA
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| Protein sequence | MKLTELANPT RFLTLAGRLL PWLAAATALA LAAGLTQGML APDDYQQGAT VKIMFVHVPN
AWLAMFVWGV MSVASLGTLV WRHPLADVAA KTAAPIGAAF TFLALVTGSL WGRPMWGTYW
EWDARLTSML VLFLMYLGLI ALWRAVEDPS RAARAAAVLT LVGAVNLPII KFSVDWWNTL
HQPASVVRMG GSTLDKAFLI PLLVTAIGFS LLFLTLHLAA MRNEILRRRV RSLQMMQASR
AEAA
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