| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0188 |
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| Symbol | |
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| ID | 6407832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 206289 |
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| End bp | 207473 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710098 |
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| Product | AFG1-family ATPase |
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| Protein accession | YP_001989226 |
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| Protein GI | 192288621 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1485] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.176309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCGC CGCACTCGCT CCGCCAGCAA TATCAATCCC TGATCGCCTC CGGCAGCATC
GAAGCCGATC CGGCGCAGGC TCGCGCGGTG CAGGCCTTCA CGCTCCTCAA CGAGACGCTC
GATGGCTATA AGCCACCGAA GAAGCAAGGC TTTTTCGGCC GTCTGTTCGG CGGAGGCGAT
GCCGGCCAGG CGCCCCCGCA AGGGCTCTAC ATCCATGGCG AGGTCGGCCG CGGCAAGACC
ATGCTGATGG ATCTGTTCTT CGACGCGAGC CCGATCGCGT TGAAGCGGCG GTCACACTTC
CACGAATTCA TGGCCGAGAC CCATGATCGC ATCAACGGCT TCCGCCAGGC GATCAAGCGC
GGCGATATTC CGGATGCCGA CGTGATGGAG CTGACGGCGG CGTCGATCCT CGACGAGGCC
TGGCTGCTGT GCTTCGACGA ATTTCACGTC ACCGACATCG CCGACGCCAT GATCCTCGGC
CGGCTGTTCA CCAAACTGTT CGAGCTCGGC ACTGTGGTGG TGGCGACGTC CAACGTCGCG
CCCGACGACC TCTACAAGGG CGGCCTCAAC CGTTCGCTGT TCATGCCGTT CATCGGTCAG
GTGAAACGGC ATATGCGGGT GATCCGCCTC GACGCGCGAA CCGATTACCG CCTGGAGAAA
TTCGCCGGCA TGAAGGTCTG GCTGGCGCCC GACGATGCCG AGGCGACCGC GACGATCGAC
CGGGCGTGGC ACCGGATCAC CGGTACGACG AAGGGTGAGC CGCGCGATAT TTCGATCAAG
GGCCGCATCC TGCACGTACC GCAGGCCGAC CATCACGTCG CGCGGTTTTC GTTCGCCGAT
TTGTGCCAGA AGCCGCTGGG GGCCAGCGAT TACCTGCGGC TCGCACATGA ATATCACACG
CTGATGATCG ATCATGTGCC GGTGATGGAC TACGCCGATC GTAACGCCGC CAAGCGGTTC
ATCGCGCTGA TCGATACGCT GTACGACAAC TCGGTGAAGC TGATGGCCTC AGCCGCCGCT
GAGCCGGCAC GGCTCTACCG CGCCACGGAA GGCTTCGAGG CGCTGGAATT CAATCGCACC
GTCTCCCGTC TCACAGAAAT GGGATCGGAA TCGTATCTGG CGCTGCCGCA CGGCCGGCGC
GACTCCACCG CCACCGGTGA GACCACCGGA TTGGTCGAAA CCTAG
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| Protein sequence | MSSPHSLRQQ YQSLIASGSI EADPAQARAV QAFTLLNETL DGYKPPKKQG FFGRLFGGGD
AGQAPPQGLY IHGEVGRGKT MLMDLFFDAS PIALKRRSHF HEFMAETHDR INGFRQAIKR
GDIPDADVME LTAASILDEA WLLCFDEFHV TDIADAMILG RLFTKLFELG TVVVATSNVA
PDDLYKGGLN RSLFMPFIGQ VKRHMRVIRL DARTDYRLEK FAGMKVWLAP DDAEATATID
RAWHRITGTT KGEPRDISIK GRILHVPQAD HHVARFSFAD LCQKPLGASD YLRLAHEYHT
LMIDHVPVMD YADRNAAKRF IALIDTLYDN SVKLMASAAA EPARLYRATE GFEALEFNRT
VSRLTEMGSE SYLALPHGRR DSTATGETTG LVET
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