| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4626 |
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| Symbol | |
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| ID | 5211612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5795699 |
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| End bp | 5797477 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640598205 |
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| Product | peptidase M23B |
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| Protein accession | YP_001278907 |
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| Protein GI | 148658702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0163104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCC GCCTGACGTG CATGGTGTTC ATTGCTGCCA TAACCCTGGC GGGTTGCGCC
GGACCGCCGC CAGTCCCCGC GCCAACCGCA GCGACGCTGC CGACCACCAG CGCACCGGTG
AACACCGCCA CACCCGCACC CCTGTCGCCA ACACCACCCG TGATACCAAC CACAACGCCG
ATCCCGCCAA CCCCTACCCC CACACCCGCG CTGGCAACTT TTTTCGATGA CCGGCGACTG
ACCTATGAGC CGGGGTTCTA TGCGATCCAG ATCCAGGCGT TCCTCGATAG CCATCCCGGA
CCGCTGAAGC GGATCGTGAT GCCAGTTGGG GATCGGCAGC ACACCTTTGC AGAAGCGTTG
ACCGGTCAGG CGATCTATTA CAGCGTCAAC CCGAAGATTA TTCTGGCGCT CATTGAACTG
CACAGCAGCC TGATCAGCGA TCCGCAGCCA ACCGCCGATC AGTTCGTGTG GGCGGTTGGG
TTTCGCGGCG AAAACGGACG ACGACGCGGA TTGCAGGCAC AGGTGCGCTG GGCAGTCCGC
GAGATGCTCT ACGCACGGCG CGATTACCCG CAGCGCGTTA CGCTCACCTT CGCCGACGGC
AGCGTTGCTC CGCCGACGGA AGAGATGTCG CTCGCCGGAT ATGCCCTGGC GCGCGTCCTT
GCCCCCACGA CGGTTCCAGA GCGTCTTCCG GGATTGATGG AACGATTTCG CTCCGTCTAT
ACAAACCTGT TCGACGACCC GCGCATCCCG CCGGATGACT GGTTCCCGCT CTCCGAACCC
TTCCTGACCC GTCCAATCGG GAAAGTAGTT CCGGTCACGT CCTTCTTCGA CCACAGCGGT
CCGTTCCTGA TGCGCAACGC CAGCGATGGC GTCACGACCT ACTGGGGACG TGTGGAAACC
GACCCGATCT TTGCGTACAA CGGTCATGAC GGGTGGGATT ACGCCGCAGC GCCGCCGGAA
CGAGCACTGG CGGCTGCCGA TGGCGAAGTG GTGTTCGCCG GAAATGCCGA CGACGGTTGC
GCCACCCGCG CGGTCGTCAT CGACCATGAG AATGGCTATC GCACGCTCTA CTGGCATCTC
CACCGCGTGG ATGTGGCGAT TGGCGAGCGT GTGGCGCGTG GGCAATCGAT CGGTATCATT
GGCAACACTG GCTGCTCGTC TGGACCCCAC CTGCACTTCG GCGTTCAGTA CCTGGGACGC
AACACCGATC CCTACGGTTG GTGCGGCATG GGAGAAGATC CATGGCGTGC GCATCCCGCC
GGCACGGTGA GCACATGGCT CTGGAAGGAT CGTCCGTCAC CGTGCGCTCC GCCACCCGAT
GGAGCGGTCG CCGTCGATGC CGGGCTCCCC GGCTTCCTGA TCGATGGGGA GGGGTGGAAC
AGCGCACCCG TGGGATATGG GGGCGAGTCG CTGTTCATCG CATCAGTCCG TGGCGCGGGG
GGACGACCGT GGAAGGTGCG CCCGCTGAAC CCGCCCGCGC TGGCGATCTG GCGCGCCACA
TTACCTTCAG CAGGAAAGTA CCGCGTGATC GCGTTTATTC CGTATGCTGT CAGCCGCCTG
GGCGATGCAA CAAACGTGCG CTATCTGGTT CAGCACGCCG ATGGAACGGC GGAAGTGATC
GTCGATGCAG CGACGCACGC GAACGACTGG GCGGAACTGG GAACCTACAC ATTCGATACA
ACCGGCGCCG AAGTTGTACT GACCAGCACA GCGGAAGACG GGATGCTCAG CGTATGGGCG
GATGTCGTCA TGTGGCTGCC CGTGTCGCCT GAAGAGTGA
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| Protein sequence | MLRRLTCMVF IAAITLAGCA GPPPVPAPTA ATLPTTSAPV NTATPAPLSP TPPVIPTTTP
IPPTPTPTPA LATFFDDRRL TYEPGFYAIQ IQAFLDSHPG PLKRIVMPVG DRQHTFAEAL
TGQAIYYSVN PKIILALIEL HSSLISDPQP TADQFVWAVG FRGENGRRRG LQAQVRWAVR
EMLYARRDYP QRVTLTFADG SVAPPTEEMS LAGYALARVL APTTVPERLP GLMERFRSVY
TNLFDDPRIP PDDWFPLSEP FLTRPIGKVV PVTSFFDHSG PFLMRNASDG VTTYWGRVET
DPIFAYNGHD GWDYAAAPPE RALAAADGEV VFAGNADDGC ATRAVVIDHE NGYRTLYWHL
HRVDVAIGER VARGQSIGII GNTGCSSGPH LHFGVQYLGR NTDPYGWCGM GEDPWRAHPA
GTVSTWLWKD RPSPCAPPPD GAVAVDAGLP GFLIDGEGWN SAPVGYGGES LFIASVRGAG
GRPWKVRPLN PPALAIWRAT LPSAGKYRVI AFIPYAVSRL GDATNVRYLV QHADGTAEVI
VDAATHANDW AELGTYTFDT TGAEVVLTST AEDGMLSVWA DVVMWLPVSP EE
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