| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4599 |
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| Symbol | |
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| ID | 5211585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5763828 |
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| End bp | 5765693 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640598178 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001278880 |
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| Protein GI | 148658675 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.593059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGA TGCGTAACGT GTGGCGGAAG AGCGGTGCGC TGGCGCTGCT CCTCATCCTG
ATCGTCCCGG TTCTGGCAGC GTGTGGCGGG CAGCCAGCCA CAGCACCGAC CACGGCGCCA
GCGGCGCAAC CGACGACTGC ACCCACTGAG GCGCCAGCGG CGCAACCGAC GACTGCGCCC
ACTGAGGCGC CAGCGGCGCA ACCGACGACT GCGCCGACCA CTCCGCCAGC GGCGCAGCGC
GGCGGTCGCC TGAAGATCCT GTACTGGCAG GCGGTGACGA CCCTCAACCC TCACCTGGCG
ACAGGTACGA AGGACTTCGA TGGCGCAACG GTTATCCTCG AACCGCTGGC GCGCTACAAC
GAGAAGGATG AACTGGTGCC CTTCCTGGCG GCGGAGATTC CAACGATCGA GAACGGCGGC
GTCGCTCCTG ATGGAACCAG CGTCACGTGG AAGCTCAAAC CAGGGCTGAA GTGGTCGGAT
GGCAGCGATT TCACGGTTGA CGACATTATC TTCACCTGGC AGTACTGCGC CGATCCTGCG
ACTGCCTGCA CCACCAAGGC GGTCTTCGAC CCGATCGAGA AGGTCGAGAA GGTCGATGAT
ACCACTGTCA AGATCATCTG GAAGGAGCCG AACGCCAACC CGTACATCTC GTTCGTCGGT
CCGAACGGCA TGATCCTGCA GAAGAAGCAG TTCGAGAAGT GCATCGGCGC GGCAGCCAGC
ACCGATGCGG CGTGCCAGGC GGCGAACCTC GCGCCGATCG GTACAAATGC CTGGAAGTTG
AAGGAGTTCA AGCCGGGCGA TGTGGTGATC TACGAACGCA ACCCCTTCTT CCGCGATGCC
GATAATGTCT TCTTCGACGA AGTGGAGATC AAGGGCGGCG GTGATGCTGC GTCAGCAGCG
CGCGCCGTGT GTGAGACGGA AGAGGTCGAT TTCGCCTGGA ATCTCCAGAT CCCGAAAGCG
GTTCTCGAGC CGATCCTTGC TTCCGGTAAG TGCGACCCGA TCGCCGGCGG TTCGTCCGGA
GTTGAGCGCA TTGTGGTCAA CTTCTCGAAC CCCGACCCGG CACTGGGCGA CAAGCGCAGC
GAGCCGGATC AACCCCACCC CTTCCTGACC GACCCTGCAG TGCGCAAGGC GATCTCGCTG
GCGATTGATC GCAAGGCAAT CGCCGAGCAG TTGTACGGTC CTACCGGCGA ACCTACCTGC
AACGTGCTGG TGGTGCCGAC TGCGGTCAAT TCGCCAAACC TGACATGCAA CCGCGATGTC
GAAGCAGCGA AGAAGTTGCT CGAAGATGCG GGCTGGAAGT TGAAAGGCTC GGTGCGGGAG
AAGGAGATCG GGGGGAAAAC GGTCAGACTG GTCGTCAGTT TCCAGACCTC GATCAATCCG
CTGCGCCAGA GCACCCAGGC GATCATCAAG TCGAACCTGG CGGAGATCGG TATTCAGGTG
AACGTCAAAG CCATTGATGC CAGCGTCTTC TTCAGTGGCG ATCCAGGCAA CCCGGATACC
CTGAACAAGT TTTACGCCGA CCTCCAGATG TACACCAACG GTCCGAACAA CGCCGATCCA
CAGCAGTACC TCCAGGGCTG GACCTGCGAA GAGCGCGCTT CGGTCGCCAA TCAGTGGAAC
GGCAACAATG ACGGTCGCTA CTGCAACCCG GAGTACGACA AGCTTTTCGA GGAGTTGAAG
AAGGAACTTG ACCCGAAGAA GCGCGTCGAA CTGGCGATCA AGATGAACGA TCTGCTGGTG
ACCGATGGTG CGGTGATTCC GCTGATCAAC CGCCAGACGC CGAATGCGAA GGTGAAGGCA
CTCAAGGGAC CCACCTTCAA CACGTTCGAC TCCGACATCT GGAATATTGC CTCCTGGAGC
AAGTAA
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| Protein sequence | MRSMRNVWRK SGALALLLIL IVPVLAACGG QPATAPTTAP AAQPTTAPTE APAAQPTTAP
TEAPAAQPTT APTTPPAAQR GGRLKILYWQ AVTTLNPHLA TGTKDFDGAT VILEPLARYN
EKDELVPFLA AEIPTIENGG VAPDGTSVTW KLKPGLKWSD GSDFTVDDII FTWQYCADPA
TACTTKAVFD PIEKVEKVDD TTVKIIWKEP NANPYISFVG PNGMILQKKQ FEKCIGAAAS
TDAACQAANL APIGTNAWKL KEFKPGDVVI YERNPFFRDA DNVFFDEVEI KGGGDAASAA
RAVCETEEVD FAWNLQIPKA VLEPILASGK CDPIAGGSSG VERIVVNFSN PDPALGDKRS
EPDQPHPFLT DPAVRKAISL AIDRKAIAEQ LYGPTGEPTC NVLVVPTAVN SPNLTCNRDV
EAAKKLLEDA GWKLKGSVRE KEIGGKTVRL VVSFQTSINP LRQSTQAIIK SNLAEIGIQV
NVKAIDASVF FSGDPGNPDT LNKFYADLQM YTNGPNNADP QQYLQGWTCE ERASVANQWN
GNNDGRYCNP EYDKLFEELK KELDPKKRVE LAIKMNDLLV TDGAVIPLIN RQTPNAKVKA
LKGPTFNTFD SDIWNIASWS K
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