Gene RoseRS_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4560 
Symbol 
ID5211545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5717906 
End bp5718850 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content55% 
IMG OID640598138 
ProductMg2+ transporter protein, CorA family protein 
Protein accessionYP_001278841 
Protein GI148658636 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACGAAGCGTT TTCGGTTCCA GTTACTATCA ATCAGACGCC CCCGGTTAAC 
CGGTGGCTGC GTGTCAGCGC TGCCCAGACC GATGCACTCG CAGTGATCAA GCAACGCCTG
GGCATCGACC TTATCCAGAC TGTGACAAGC GGTATCAGCC AGGTAGGGGA ATTCCTGATT
TACCCTCTGA CGTTTCTGAG CGTCGAGGGG AACAAGAAGA TAATCAGCAA GGTGATCTTT
ATAGTTGGGC GGGAGATTCT TGTCTCCCTG GAGCCAGAGC CTGCTCCAAA ACCGCTCGGC
GTCGCGGTAT CACGGATGCA GCGTGACGGA CGTGATAACG ATGCATTCGA AGCCTTCGCT
ATTGTCTTGC AGTCGATCAA CGATGCCACC GACGAACTGC TCGACTCGTT GAACGAGGAT
CTCGGCGAGG CGCTGGTGCA GACGAATGCC GTTCTCAATA GCCTCGAATC ACGCGAGCGT
GACTTCGGGG TCAGCGATGT CGTATCGACC CAGGTTGAGT TGGGCGTAGT CGAGGATTTG
CTTTCGGAGT GCATCCAGAC CCAACTGCAA CTCGCCCTGG TGGCGAGACA AACGCTGGCG
CGTCTTCCGC AGGAGTTTTC CCATCTCAGG CAACGTTACC ACACCCTCAT TGATGACATC
GAAGGGGTCG AGGAGCACGT GCATTTCGTC CATGACCGTG TACGTCTCTT ACAAACGTCC
AATAACCTGG CGCTGAGCGT CAAGCAGAAT CAGATTGTCA AGGTGTTTTC GGTGCTCACC
GCAGTGTTTC TGCCCGCTCT ACTCATTTCG ACGTACTACA GCATGAATTT CGCCTATATG
CCTATCCTGG AGTGGCAGTA CGGCGAGCCG ATGGTTATCG CCCTGACGGC GTTGCTGGCG
CTGCTGCCAC TGATTTACGT CAAACAGCGC GGGTTGCTAC GGTAA
 
Protein sequence
MSQNEAFSVP VTINQTPPVN RWLRVSAAQT DALAVIKQRL GIDLIQTVTS GISQVGEFLI 
YPLTFLSVEG NKKIISKVIF IVGREILVSL EPEPAPKPLG VAVSRMQRDG RDNDAFEAFA
IVLQSINDAT DELLDSLNED LGEALVQTNA VLNSLESRER DFGVSDVVST QVELGVVEDL
LSECIQTQLQ LALVARQTLA RLPQEFSHLR QRYHTLIDDI EGVEEHVHFV HDRVRLLQTS
NNLALSVKQN QIVKVFSVLT AVFLPALLIS TYYSMNFAYM PILEWQYGEP MVIALTALLA
LLPLIYVKQR GLLR