| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4505 |
|---|
| Symbol | |
|---|
| ID | 5211490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5648656 |
|---|
| End bp | 5649234 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640598083 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278786 |
|---|
| Protein GI | 148658581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.890484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0392593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA AACGAAGCCT GGACGGGATG GACATCGAGA CGAAGGCGAC ACGCTCGGAT
CGCACAAGCG TCGAAATGAG CGGTGCGCTC GCCGGGTTGG TCGGCGGAGT GATGATGGCG
ATTGTTGGTG CGATTCTTGC GCTTGCGATC GGCGATGATC TCTGGAAGGC GCCAAAATTG
ATCGCCACGT TCGTCGTCAG CCCGGATTCG GTGGCTGCGC CCGGCTTTCT TGCCGGTCCG
GTGATTATCG GGAGCATGAT CCACCTGGCG CTTTCGGTGC TCTTTGGGGT TGGGTTTGGC
ATCCTGACGA CACGCATCTG GAAGATGCCG CTTGCGTATG GCGCTCCGAT GGTGTTCGGG
TTTGTGTATG GGCTGGCGAT CTGGCTGATT GCGTACTTTA TCGTGCTCCC ACTCCTCAAC
CCGTTGATCC TGGAAATCTA TGCGCCGTCG TTCCTGATCC AGAACCTGAC CTATGGCATA
TCGGTTGGTC TGGCGTATGG CTTGCTGCAT GCATCGTCGC GCAGTGAGAT CACGGCGGGG
CGACGCCTGC AGCGCGGGGA GGTGAAGACG GCTCGTTAA
|
|---|
| Protein sequence | MNAKRSLDGM DIETKATRSD RTSVEMSGAL AGLVGGVMMA IVGAILALAI GDDLWKAPKL
IATFVVSPDS VAAPGFLAGP VIIGSMIHLA LSVLFGVGFG ILTTRIWKMP LAYGAPMVFG
FVYGLAIWLI AYFIVLPLLN PLILEIYAPS FLIQNLTYGI SVGLAYGLLH ASSRSEITAG
RRLQRGEVKT AR
|
|---|
| |