Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4492 |
Symbol | |
ID | 5211477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5631244 |
End bp | 5632209 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640598071 |
Product | hypothetical protein |
Protein accession | YP_001278774 |
Protein GI | 148658569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.709457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000617904 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCGCCT TCCTGCTTGC AGGTTGCCAG GCAGTGCTGA GTAGCGCGCT GCTGTTTGCC GCGTGTGCAA AGGCGCGTCA GCCTGACGTG CTGGCAGCGG TGTTGCGGGC CGGTGGTCTG CCCGCAGCGG TCATCCGTCT GCTGATACTG TTGCTTCCGG CGTTGGAGGC TGGGTTGGCG CTGGCGGTGC TGACGAGTCC GCCTGCGCTT CTGCCGTGGA CGATGGGGAT CGTCACTGGA ATGCTGCTGC TCGTTACCGT GTGGGGCATG TGGGTATGCG TTCGGCGGTT GTCGCTGGCG TGCAGTTGCC CCAGTACTGG AAAACGCGGG AGGTGGAGCG TCGCGCTGAC GTGCAACGCC GGACTTGCGC TGCTGAGCGG TGTTGGGACG ACGCTGAGCT TCTGGACGCC TGGTGTGTCG CCGGGATTGC CTGCGTGGGG GATGGCGTTG GTTGCCATCG GCGGCGCAGC GCTGATAGCG CTCGTGATGC ACGTGCGAAC GGCAACGCAA GAGACTTCAG ACTATCAACA GGCGCCACGC GGAATGGCGC CGGTCGGGCG CCTGCACACA CCGGCGCGAC GACGACTCCT GCAGTTCTTT GGAGCGGCAG GCGGCGCGAT CCTGGCGTTT CCACTCTTCC GCAGCGCGCC TGTGTTGGGC GATGGAGGGT CAAATGTCGT GGCACAGCGC ATGCCTGCGC CCACGACGGC TCCGACAGAT ACGCTGAATG GTTGCATCTC ACCACCCCGA CCAGAGGAAG GCGGTTCAGA CAGTGGTCAG TATAGTCGCT GTTCTGTACA GGTCTGTTAT TGCACGTCGT GCTTTGAAGT ATATGACAGC ATCGACAAAT CGTGGGTCTC AGTCGCCAGA TATGTGTGCT ATGATTCCTG CGATGGCACC ACAGTTTGCT CAACGCCTAC CTGGTCGTAT AGAGGGCGCG TGTGCCGTCA ACTCGGTTGT CCGTAA
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Protein sequence | MIAFLLAGCQ AVLSSALLFA ACAKARQPDV LAAVLRAGGL PAAVIRLLIL LLPALEAGLA LAVLTSPPAL LPWTMGIVTG MLLLVTVWGM WVCVRRLSLA CSCPSTGKRG RWSVALTCNA GLALLSGVGT TLSFWTPGVS PGLPAWGMAL VAIGGAALIA LVMHVRTATQ ETSDYQQAPR GMAPVGRLHT PARRRLLQFF GAAGGAILAF PLFRSAPVLG DGGSNVVAQR MPAPTTAPTD TLNGCISPPR PEEGGSDSGQ YSRCSVQVCY CTSCFEVYDS IDKSWVSVAR YVCYDSCDGT TVCSTPTWSY RGRVCRQLGC P
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