Gene RoseRS_4492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4492 
Symbol 
ID5211477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5631244 
End bp5632209 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID640598071 
Producthypothetical protein 
Protein accessionYP_001278774 
Protein GI148658569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.709457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000617904 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCGCCT TCCTGCTTGC AGGTTGCCAG GCAGTGCTGA GTAGCGCGCT GCTGTTTGCC 
GCGTGTGCAA AGGCGCGTCA GCCTGACGTG CTGGCAGCGG TGTTGCGGGC CGGTGGTCTG
CCCGCAGCGG TCATCCGTCT GCTGATACTG TTGCTTCCGG CGTTGGAGGC TGGGTTGGCG
CTGGCGGTGC TGACGAGTCC GCCTGCGCTT CTGCCGTGGA CGATGGGGAT CGTCACTGGA
ATGCTGCTGC TCGTTACCGT GTGGGGCATG TGGGTATGCG TTCGGCGGTT GTCGCTGGCG
TGCAGTTGCC CCAGTACTGG AAAACGCGGG AGGTGGAGCG TCGCGCTGAC GTGCAACGCC
GGACTTGCGC TGCTGAGCGG TGTTGGGACG ACGCTGAGCT TCTGGACGCC TGGTGTGTCG
CCGGGATTGC CTGCGTGGGG GATGGCGTTG GTTGCCATCG GCGGCGCAGC GCTGATAGCG
CTCGTGATGC ACGTGCGAAC GGCAACGCAA GAGACTTCAG ACTATCAACA GGCGCCACGC
GGAATGGCGC CGGTCGGGCG CCTGCACACA CCGGCGCGAC GACGACTCCT GCAGTTCTTT
GGAGCGGCAG GCGGCGCGAT CCTGGCGTTT CCACTCTTCC GCAGCGCGCC TGTGTTGGGC
GATGGAGGGT CAAATGTCGT GGCACAGCGC ATGCCTGCGC CCACGACGGC TCCGACAGAT
ACGCTGAATG GTTGCATCTC ACCACCCCGA CCAGAGGAAG GCGGTTCAGA CAGTGGTCAG
TATAGTCGCT GTTCTGTACA GGTCTGTTAT TGCACGTCGT GCTTTGAAGT ATATGACAGC
ATCGACAAAT CGTGGGTCTC AGTCGCCAGA TATGTGTGCT ATGATTCCTG CGATGGCACC
ACAGTTTGCT CAACGCCTAC CTGGTCGTAT AGAGGGCGCG TGTGCCGTCA ACTCGGTTGT
CCGTAA
 
Protein sequence
MIAFLLAGCQ AVLSSALLFA ACAKARQPDV LAAVLRAGGL PAAVIRLLIL LLPALEAGLA 
LAVLTSPPAL LPWTMGIVTG MLLLVTVWGM WVCVRRLSLA CSCPSTGKRG RWSVALTCNA
GLALLSGVGT TLSFWTPGVS PGLPAWGMAL VAIGGAALIA LVMHVRTATQ ETSDYQQAPR
GMAPVGRLHT PARRRLLQFF GAAGGAILAF PLFRSAPVLG DGGSNVVAQR MPAPTTAPTD
TLNGCISPPR PEEGGSDSGQ YSRCSVQVCY CTSCFEVYDS IDKSWVSVAR YVCYDSCDGT
TVCSTPTWSY RGRVCRQLGC P