Gene RoseRS_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4421 
Symbol 
ID5211406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5541433 
End bp5542695 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content47% 
IMG OID640598001 
Producthypothetical protein 
Protein accessionYP_001278704 
Protein GI148658499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.491633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.170958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAG CAACCAAGAT CTCCGAATAC GTTCAACTCT TTGTCGACTC GGTTTTGGGT 
ATACGTGGCG TAGAGATCGA CGATCGACAC GAGCAAGTTG TTTTTAGAGA GTTATCACGA
TTGCCGGAAA AACAATTGTA TATCCTTGAT CGGTGGGGCA ATTGGGAATG GACTTTTTCT
GAGTCCCAGC GCGAAGGTAA ACTCTACTAT CCCTGGATTG ATGAATCCCT GGCTGAACTG
CGCCATCGTC TCATGCAAGA ACATCCTGAG TGGCCATGGA TGCCTCTCTG GCCAGAGAGA
CGCTCTTTTG CACTTTGTCT GACACACGAT GTTGATCTGG TGTCACAATA CCACACGGTG
CCTGAGCTTT TCAGGGTTTG GTATCGTGTA GTTCGATCTT CTGGAAAGAA GATGGAAAAG
GTTAGACGGA TGATAGGATC GCTACGTGCC CTAACGATCC CTTTATCGAA AACAAGAATA
GATCCGTTGT GGCATTACGA GGATTGGTTG AAACTTGAGG ATCGCTATGG CTTTCGATCT
ACTTTTTTCT TCTTTCCTTC GCATGTTGCC AAACCATCTG TTTGGGACGC AGCGTACCAT
TTTGATGACC ACGTTCGTTT CGCTGGTCGC TCGATGAGAG TGCGAGATAT GATGCAGGTT
ATTCAGCGGG CCGGATGGGA TGTAGGACTG CATGGAAGTT ATTATTCTGC TACTGAACCA
GGAATTCTTG GCGATGAACG GTCTCAGATC GAAAGAGTAA TCGGAGAAAG AGTTATTAGC
ATAAGGCAGC ATTGGTTACA TTATGATATT CTCCGTACAC CGCGTTTACA GGCCGAAGCG
GGGTTATTGT GTGACTCTAC TCAAGGATTC AACCGAAATA TCGGATTCCG TGCTGGAACT
TCTTTCCCAT ATTGGTGTTG GGATCACGAA TCACAGTCTT CTCTACCCGT TCTTGAGATT
CCTATGCACA TTATGGATGG TGCTCTCTTT ACAACAAATG CGCTTGAGTA TAACCTTGAA
CTGGCAATTC ATCACTGTGT GCAATTGTTG GATCGGGTTG CTAAGGTGGG AGGTTGCCTG
ACACTTAACT GGCATCCGAA CTATCTTAAT GATGACAAAT GGTGGTCGGT ATACGAGACG
CTTTTAGAGG AAGCCGCGCG TCGAAATGCC TGGGGATGTT CAGTGGGGCA ACTGTATTCC
TGGTGGACGC AACGAGAACG TCGCCTCGAA TGGATTCCTG CGTCTGCGTC ATCAGGCATT
TGA
 
Protein sequence
MVKATKISEY VQLFVDSVLG IRGVEIDDRH EQVVFRELSR LPEKQLYILD RWGNWEWTFS 
ESQREGKLYY PWIDESLAEL RHRLMQEHPE WPWMPLWPER RSFALCLTHD VDLVSQYHTV
PELFRVWYRV VRSSGKKMEK VRRMIGSLRA LTIPLSKTRI DPLWHYEDWL KLEDRYGFRS
TFFFFPSHVA KPSVWDAAYH FDDHVRFAGR SMRVRDMMQV IQRAGWDVGL HGSYYSATEP
GILGDERSQI ERVIGERVIS IRQHWLHYDI LRTPRLQAEA GLLCDSTQGF NRNIGFRAGT
SFPYWCWDHE SQSSLPVLEI PMHIMDGALF TTNALEYNLE LAIHHCVQLL DRVAKVGGCL
TLNWHPNYLN DDKWWSVYET LLEEAARRNA WGCSVGQLYS WWTQRERRLE WIPASASSGI