Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4421 |
Symbol | |
ID | 5211406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5541433 |
End bp | 5542695 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598001 |
Product | hypothetical protein |
Protein accession | YP_001278704 |
Protein GI | 148658499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.491633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.170958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAG CAACCAAGAT CTCCGAATAC GTTCAACTCT TTGTCGACTC GGTTTTGGGT ATACGTGGCG TAGAGATCGA CGATCGACAC GAGCAAGTTG TTTTTAGAGA GTTATCACGA TTGCCGGAAA AACAATTGTA TATCCTTGAT CGGTGGGGCA ATTGGGAATG GACTTTTTCT GAGTCCCAGC GCGAAGGTAA ACTCTACTAT CCCTGGATTG ATGAATCCCT GGCTGAACTG CGCCATCGTC TCATGCAAGA ACATCCTGAG TGGCCATGGA TGCCTCTCTG GCCAGAGAGA CGCTCTTTTG CACTTTGTCT GACACACGAT GTTGATCTGG TGTCACAATA CCACACGGTG CCTGAGCTTT TCAGGGTTTG GTATCGTGTA GTTCGATCTT CTGGAAAGAA GATGGAAAAG GTTAGACGGA TGATAGGATC GCTACGTGCC CTAACGATCC CTTTATCGAA AACAAGAATA GATCCGTTGT GGCATTACGA GGATTGGTTG AAACTTGAGG ATCGCTATGG CTTTCGATCT ACTTTTTTCT TCTTTCCTTC GCATGTTGCC AAACCATCTG TTTGGGACGC AGCGTACCAT TTTGATGACC ACGTTCGTTT CGCTGGTCGC TCGATGAGAG TGCGAGATAT GATGCAGGTT ATTCAGCGGG CCGGATGGGA TGTAGGACTG CATGGAAGTT ATTATTCTGC TACTGAACCA GGAATTCTTG GCGATGAACG GTCTCAGATC GAAAGAGTAA TCGGAGAAAG AGTTATTAGC ATAAGGCAGC ATTGGTTACA TTATGATATT CTCCGTACAC CGCGTTTACA GGCCGAAGCG GGGTTATTGT GTGACTCTAC TCAAGGATTC AACCGAAATA TCGGATTCCG TGCTGGAACT TCTTTCCCAT ATTGGTGTTG GGATCACGAA TCACAGTCTT CTCTACCCGT TCTTGAGATT CCTATGCACA TTATGGATGG TGCTCTCTTT ACAACAAATG CGCTTGAGTA TAACCTTGAA CTGGCAATTC ATCACTGTGT GCAATTGTTG GATCGGGTTG CTAAGGTGGG AGGTTGCCTG ACACTTAACT GGCATCCGAA CTATCTTAAT GATGACAAAT GGTGGTCGGT ATACGAGACG CTTTTAGAGG AAGCCGCGCG TCGAAATGCC TGGGGATGTT CAGTGGGGCA ACTGTATTCC TGGTGGACGC AACGAGAACG TCGCCTCGAA TGGATTCCTG CGTCTGCGTC ATCAGGCATT TGA
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Protein sequence | MVKATKISEY VQLFVDSVLG IRGVEIDDRH EQVVFRELSR LPEKQLYILD RWGNWEWTFS ESQREGKLYY PWIDESLAEL RHRLMQEHPE WPWMPLWPER RSFALCLTHD VDLVSQYHTV PELFRVWYRV VRSSGKKMEK VRRMIGSLRA LTIPLSKTRI DPLWHYEDWL KLEDRYGFRS TFFFFPSHVA KPSVWDAAYH FDDHVRFAGR SMRVRDMMQV IQRAGWDVGL HGSYYSATEP GILGDERSQI ERVIGERVIS IRQHWLHYDI LRTPRLQAEA GLLCDSTQGF NRNIGFRAGT SFPYWCWDHE SQSSLPVLEI PMHIMDGALF TTNALEYNLE LAIHHCVQLL DRVAKVGGCL TLNWHPNYLN DDKWWSVYET LLEEAARRNA WGCSVGQLYS WWTQRERRLE WIPASASSGI
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