| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4324 |
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| Symbol | |
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| ID | 5211308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5425247 |
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| End bp | 5427109 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640597908 |
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| Product | hypothetical protein |
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| Protein accession | YP_001278612 |
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| Protein GI | 148658407 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.534524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.390978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAA TCCGTATCGT CCTCTGGCTT GTCTCCTGTC TGGCACTGGC GCTCTCCGCC
TGCGGACCCC TCTCGATTGC CGAACAGGAG CGCATCCGCG ATCTCCAAAC GGTTGAAGCT
TCGACGCCGA CGGCGACGCC GCTCCCGCCA ACCGATACGC CTGTGCCGCC GTCGCCAACT
CCCACCGCAA CCCCCGGTCC GACAGCAACG CCGGTTCCTC CCACTGCCAC CCCTGTGCCG
TCGCCAACGC CGCTGCCGCC GACTCCCACG CCCAACCCGG CGCTGGCGCA GTTCAGTCTG
TGCAATCAGT CGGCTGGCGA CCCGACCGGC GGCAGGTTCA GTATGCGGGT AACAGCAATC
ACAACGACGG TCGATCTGTT CTTTGAACGC CTCGAAGTTG CGCTCGACGT TCCTGCCGAC
TCGGCGCAAC CGCATGCGTT CGCCCGCTGC CGCCCCGCGC CCGCCGCGCC CCAGACGGTT
GGCGAGGTCG AGGTGGCGGG CGCGTACCTG ATCGAGGTGC AGTTCGACGG ATGGCTGCGC
GATGAGGCGT TTCGCGCGTC GCTCGCTGCG CCGACCGTGC CGCTGAGCGG GACGCAGGTG
ATGCGCGCGG CGGCATTCCG CATTCCCCCT GGCGTTGCAA CCGGCGCCAC GCTGGTCATC
GGCGTGGATC AACCGCTGCC GTTCCGCCTG CGCCTGGAAG ATAACCCGCT GCGCCTGATC
ATCGATGTGG CAACGAGCGG ACCGGTCAGC CAGGCGAGCG ATCTGCTCCG CATGCCGACC
GGCGTAACGC CCGCTCCGAC AACGCCGATC TTCTACCTCG CCGATGGCGA TATCTGGCGT
CTCAGCAACG GCACAGCGGA AAATCTCACC GAAAGCGTTC GCGCCGGGCA GTTTGGCGAT
GTGACGGCGC TGACTGCGCG CGCCGACCGG CGATTGATCG CCTTCTGTGC AACCGCACCG
GGCGCAATTG CGGCGGATGT AACAGCGGCA TCGACCCTGT GGGTGCTGGA ACTGGACAGC
GGCGCGGTGC GTCAGTTGAC TCCGCCGCCG CGCGGGCGCT CGTGCGCCGA CCCGGCGATG
TCGCCGGATG GTACGACGAT TGCTTATGCC GTTGATGAGT CGGGGGTTTC ACCGCCGCAA
CTGCGCATCT TTTCAGTGCA GATCTTCCCC GGTGCACCGG CAGTGGCGTT GACACCTTCC
GGCGATGAGT GGAGCCGCTA TGCACCGCAG TGGCTCGATG ATGCGCGCAT TGTCTATGCC
GCCACAGCGG AAGATGGACG GCAGACGCTG TTCCTGCGCG AACCGGATGG CACGGAACTC
GACATCGGTA TGGGGTTGTT GGTATCGGGA ATAGGCGGGC AGCGCAGCGC GCGGTACCGT
GGCTTCGGTC GCATGCTGGC AGATCCCAAC GGCAGCGCTA TCGCCGTTGA AGCGCTGCGG
ATCGACCGTC CGGGGGCGGA TCTACTGATC CTGAACCCGA CCGGCGCCGA AATCGAACGT
CTCAGCCCGA TTGCTGCCGG CTTCTGGAAC CGCCCCGTCG CCTGGAGCGC CGATGGTGCG
CTCTACTATC TCTCGACGGC GTGTGCAAGC GGGGCGGTGT TTGAGTATAC CCTGCACGTG
CGCACCCTCG ATGGCGCGGA TCGGGTGATT GCCGCCGGGA TCGCGCCTGG CGACCTGGGG
GTGTTCGCGG TGCGCCGGAA TGCACTGGCG TATGTGACGT TCGACCGCCT GCCGGAAGGA
TCAGCGGGTC CGCTCCGCGT CGATCCAGAC GCGCCATCGG CGCTCTGGTA CTGGGATCTG
GCAGGCAATG CCCGCGCGCG CCTGCTGGAA ACCAATCGTG CAATTACTGC TCTGGCGCCG
TGA
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| Protein sequence | MTRIRIVLWL VSCLALALSA CGPLSIAEQE RIRDLQTVEA STPTATPLPP TDTPVPPSPT
PTATPGPTAT PVPPTATPVP SPTPLPPTPT PNPALAQFSL CNQSAGDPTG GRFSMRVTAI
TTTVDLFFER LEVALDVPAD SAQPHAFARC RPAPAAPQTV GEVEVAGAYL IEVQFDGWLR
DEAFRASLAA PTVPLSGTQV MRAAAFRIPP GVATGATLVI GVDQPLPFRL RLEDNPLRLI
IDVATSGPVS QASDLLRMPT GVTPAPTTPI FYLADGDIWR LSNGTAENLT ESVRAGQFGD
VTALTARADR RLIAFCATAP GAIAADVTAA STLWVLELDS GAVRQLTPPP RGRSCADPAM
SPDGTTIAYA VDESGVSPPQ LRIFSVQIFP GAPAVALTPS GDEWSRYAPQ WLDDARIVYA
ATAEDGRQTL FLREPDGTEL DIGMGLLVSG IGGQRSARYR GFGRMLADPN GSAIAVEALR
IDRPGADLLI LNPTGAEIER LSPIAAGFWN RPVAWSADGA LYYLSTACAS GAVFEYTLHV
RTLDGADRVI AAGIAPGDLG VFAVRRNALA YVTFDRLPEG SAGPLRVDPD APSALWYWDL
AGNARARLLE TNRAITALAP
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