| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4253 |
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| Symbol | |
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| ID | 5211238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5336117 |
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| End bp | 5336899 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597842 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001278546 |
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| Protein GI | 148658341 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAT TGAAGGATAA AGTTGCGCTC ATCACCGGTG CAGCGCGTGG CATTGGTCGG
GGGATTGCGC TCTGCATGGC GGAAGAGGGC GCCGACGTCG TGCTCAACGA TTTGCCGCCC
GACGCTCCGG GGGTGGTCGA TGCCCGCGCC ACCGCCGCCG ACATCGAGGC AATCGGTCGG
CGTGCGCTGG TGGTGTACGG CGATGTGGCG GATCGGGATG CCGTCGATCA GGTGTTCGCC
GCAGCCATCG AGCAGTTTGG ACGGGTCGAT ATTGCGGTTG CCAATGCTGC GTTTTCAATC
CGGGAACTCG TGGTGGAGGC GCAGTGGGAG CATGTGCTGC GCACCATCGA GGTGACGCAG
TTCGGCGTCT TTCACACCTG CCAGGCGGCG GCGCGCCACA TGGTCGCGCG CGGCGGTCCT
GGCAAAATCA TCATTATTGG TTCGATCCTG GCGCAGATTC CGCTGCCGAC CAGCGCAGCG
TACAACATGG CAAAAGCGGC GGTCAACCAC CTGGCATCGA CAATGGCGGC GGAACTGGCG
CCGTACCGCA TCAATGTGAA TGTCATCAAT CCAGGGCATA TCGACACCCC CGGCGAACGC
AAATTCGCCA CCGAGGAAGA GTTGCAGCGT GCAGCGCAGC AGATACCATG GGGACGCCTG
GGAACGCCGC ACGATATTGG TCGTGCGGCG GTGTTTCTTG CCAGCGACGA TGCCGATTAC
ATCACCGGCA GCGCCCTTTG CGTCGATGGC GGGTACCGGG TGGGGATGCG GTTGTACGGA
TGA
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| Protein sequence | MQRLKDKVAL ITGAARGIGR GIALCMAEEG ADVVLNDLPP DAPGVVDARA TAADIEAIGR
RALVVYGDVA DRDAVDQVFA AAIEQFGRVD IAVANAAFSI RELVVEAQWE HVLRTIEVTQ
FGVFHTCQAA ARHMVARGGP GKIIIIGSIL AQIPLPTSAA YNMAKAAVNH LASTMAAELA
PYRINVNVIN PGHIDTPGER KFATEEELQR AAQQIPWGRL GTPHDIGRAA VFLASDDADY
ITGSALCVDG GYRVGMRLYG
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