| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4241 |
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| Symbol | |
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| ID | 5211226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5316310 |
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| End bp | 5317869 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597830 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001278534 |
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| Protein GI | 148658329 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00359049 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCGTC CAGAGGCGCA TCGTATGCCA CATCTTCAAA CGACGACGGC GACCGGATCG
ATGTACCGGA TCGTTGTGAT CATGCTGTTC GCAGCGGCGG CATTGCTGGC GACGATTAAC
CTGCCCTACG CGCCGCGCAC CTGGTTCGAT GAGGGATCGC ATCTCCACGT ACCTGAGACG
CTGGTCCGAT ACGGGAAGTA TGCCGACATC AGCGCCACTC CTGATGGCGG CGTCGAGTTC
CGCTACCACG GTCCCACGAT CGGCATCGGT CCGACGATTA TGCTGCCGGT TGCGGCGGTC
TATCAGGCGT TCGGCATCGG TCTGACGCAG GCGCGACTGG TGATCGTGAT CTATTTTGCT
ATTGCAGTTG TTGCCGGGTA TGCGCTTGCG CAGCGTCTCT ATGGCGGGTG GCCCGCGCTC
ATCGCCCTGG CATTGCTGCT GGCGTCGCGC ACGGTCAACT ATGAGGGGTT GATCGAGTAT
GGGCGGCAGG TGCTCGGCGA GGCGCCGGGG GTCGCATTCG TTTTTCTGGG AATGCTGGCA
TGGCTGACTG CGTTGAAGAC GGCGACAGAG CTGTCGGCGC AGCGGACGCA TCTCATCTGG
AGCGTGCTGG CAGGATTGGG GTTCGGGATG GCGCTGGTCA CGAAGAATCA GTTCGTGCTG
ATTGTACCCC TGGCGCTCCT GTTGACCGCG CTGCTCGACT GGCGCTACTA CCGGGCTGGC
AGTTGGGTGC TGCGTCTGGT TCCTCTTGTC GTGTCGGTCG CGTGCTTTGG CGTCTGGACG
TTGACGCAGT TTGCGCTGCT CGGTCCCGGA ACTTTCTTCG AGAACATTCA GCAGACACGT
CAGGCAGCTG GAGGCGCGAT TTTCGTCTTT AATATCCGAT CAACGCTGCG CGCCGGATAT
TACCTGTTGC GCCCGGATCT GTACGGCGGG TTGATCGTTC CGGCGATGGC GTACACCATC
TGGCGCGCGC GCAGCCGCAC GTCGCAGGGG TTGAGCGAAG CGCTGCTGGC ACTGTTGATC
GGTCTGTGGC TGGCATGGTT CGTCGGCGCT TCGCTGGGCT GGCCCCGCTA TGCATTCCCG
GCAGTCGCCC TGAGCGCGCT GACCGTCGCC CGTCTGGCAT TCGACACGGT AGCCTGGTTG
CGCCGTCTGC TGCCGGTTGC CGCGACAGTT GCGGTTGTCT ACCTGATTGC GATCATTGCG
TTGCCGCTCG CTCTGACGGC GCGCGTTGTG TTCACTCCCG ACGACAGTGC ACAGCGGTTT
GCGGCGTATC TGAATGCCAC CGTGCCGGAA ACGGCAATCA TCGCAACATG GGAGCCAGAA
CTCGGCGTAT TGACCGACCA CAACTATCGC TACCCGCCGC AACCGACGCT CGATCAGGCA
GTGCGTTCCA CCTGGCTGGG GGGTGCGCCG GTTCAGTACA ACTGGTATGC GGAGCGCCCG
ACGTATGTCG TGGTTGGCGG TTTCGGCAGT TATACTGGCG TGTACAATAC GCCGGAACTG
GAACGCCACT ATATTCAGGT GGCGCAGATC GGAACCTATG CGCTCTTTAT GCACCGTTAA
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| Protein sequence | MIRPEAHRMP HLQTTTATGS MYRIVVIMLF AAAALLATIN LPYAPRTWFD EGSHLHVPET
LVRYGKYADI SATPDGGVEF RYHGPTIGIG PTIMLPVAAV YQAFGIGLTQ ARLVIVIYFA
IAVVAGYALA QRLYGGWPAL IALALLLASR TVNYEGLIEY GRQVLGEAPG VAFVFLGMLA
WLTALKTATE LSAQRTHLIW SVLAGLGFGM ALVTKNQFVL IVPLALLLTA LLDWRYYRAG
SWVLRLVPLV VSVACFGVWT LTQFALLGPG TFFENIQQTR QAAGGAIFVF NIRSTLRAGY
YLLRPDLYGG LIVPAMAYTI WRARSRTSQG LSEALLALLI GLWLAWFVGA SLGWPRYAFP
AVALSALTVA RLAFDTVAWL RRLLPVAATV AVVYLIAIIA LPLALTARVV FTPDDSAQRF
AAYLNATVPE TAIIATWEPE LGVLTDHNYR YPPQPTLDQA VRSTWLGGAP VQYNWYAERP
TYVVVGGFGS YTGVYNTPEL ERHYIQVAQI GTYALFMHR
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