Gene RoseRS_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4162 
Symbol 
ID5211146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5210932 
End bp5211918 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID640597751 
Productpyruvate carboxyltransferase 
Protein accessionYP_001278456 
Protein GI148658251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAAG GCGAGAGCCA CACGCGCGGA CACAAGGAGG TGACGATGAA CGCTCTTCCT 
CGCTTTCCCG ATCATGTATC CATCCGCGAA GTCGGTCCGC GCGATGGCCT GCAAAATGAG
GATGTCATCC TCACCACTAC CCAGAAAGTT CAGTTGATCG ACCGTCTCGC CGACACGGGG
TTGACCCTGA TCGAAGTCGG CGCATTTGTT CGTCCCGCCA ACGTGCCGCA GATGGCGGAT
ACGGCGGATG TCTTCGCGGC GATCTCCCGT CGTCCCGGCG TTGTTTACAG CGCTATCGTT
CCCAATGCCA TCGGTGCGCG ACGGGCTGTT GCAGCGCAGG CGGATGCGCT CCAGGTCTTT
CTCAGCGCCA GTGAAAGCCA TAACCGCAGC AATGTCAATA TGTCGATTGA GCAATCGCTG
GCACAGGCTG CCGACATCGC GGCTATCGCC CGTGAAGCAG GCGTGTGTTT CGAGGCGGTA
GTGTCGGTTG CATTCGGGTG CCCGTTCGAG GGGGATGTGC CGCTGGATCG AGTCATGGAT
CTGACAGCGC GCCTGTTTGA TCTGGGCGCC GAACAGGTGA CGTTCGGCGA TACGACCGGC
ATGGGGCATC CGGCGCTGGT GCGCGATCTG GTTCTGGCGT TCTATGAGCG CTTCCCGCAG
GCGCATCCTC GTCTGCATCT CCATAGCGCT CGCGGTGCAG GATTGGCAAA TGTGCTCATG
GCGCTGTCGC TTGGAGTAGA CCGGTTCGAT GCCAGTGTCG GCGGGATCGG CGGTTGCCCG
TTTGCACCGG GCGCACCCGG CAATATCTGC ACCGAAGACC TGGTGCACAT GCTCCACGAG
ATGGGTATCT CGACCGGTAT TCGCCTGCCA GCGCTGCTCG ACGTTGCGCG TATGCTCGAA
GGGATGCTGG GGCGCACGGT GCCGGGGCAG ACGATCAAAG CTGGCATCTG CAAGCATTTG
CCGCCGGATG GCGCACCGCG TCGGTGA
 
Protein sequence
MGKGESHTRG HKEVTMNALP RFPDHVSIRE VGPRDGLQNE DVILTTTQKV QLIDRLADTG 
LTLIEVGAFV RPANVPQMAD TADVFAAISR RPGVVYSAIV PNAIGARRAV AAQADALQVF
LSASESHNRS NVNMSIEQSL AQAADIAAIA REAGVCFEAV VSVAFGCPFE GDVPLDRVMD
LTARLFDLGA EQVTFGDTTG MGHPALVRDL VLAFYERFPQ AHPRLHLHSA RGAGLANVLM
ALSLGVDRFD ASVGGIGGCP FAPGAPGNIC TEDLVHMLHE MGISTGIRLP ALLDVARMLE
GMLGRTVPGQ TIKAGICKHL PPDGAPRR