Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4162 |
Symbol | |
ID | 5211146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5210932 |
End bp | 5211918 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597751 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001278456 |
Protein GI | 148658251 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAAAG GCGAGAGCCA CACGCGCGGA CACAAGGAGG TGACGATGAA CGCTCTTCCT CGCTTTCCCG ATCATGTATC CATCCGCGAA GTCGGTCCGC GCGATGGCCT GCAAAATGAG GATGTCATCC TCACCACTAC CCAGAAAGTT CAGTTGATCG ACCGTCTCGC CGACACGGGG TTGACCCTGA TCGAAGTCGG CGCATTTGTT CGTCCCGCCA ACGTGCCGCA GATGGCGGAT ACGGCGGATG TCTTCGCGGC GATCTCCCGT CGTCCCGGCG TTGTTTACAG CGCTATCGTT CCCAATGCCA TCGGTGCGCG ACGGGCTGTT GCAGCGCAGG CGGATGCGCT CCAGGTCTTT CTCAGCGCCA GTGAAAGCCA TAACCGCAGC AATGTCAATA TGTCGATTGA GCAATCGCTG GCACAGGCTG CCGACATCGC GGCTATCGCC CGTGAAGCAG GCGTGTGTTT CGAGGCGGTA GTGTCGGTTG CATTCGGGTG CCCGTTCGAG GGGGATGTGC CGCTGGATCG AGTCATGGAT CTGACAGCGC GCCTGTTTGA TCTGGGCGCC GAACAGGTGA CGTTCGGCGA TACGACCGGC ATGGGGCATC CGGCGCTGGT GCGCGATCTG GTTCTGGCGT TCTATGAGCG CTTCCCGCAG GCGCATCCTC GTCTGCATCT CCATAGCGCT CGCGGTGCAG GATTGGCAAA TGTGCTCATG GCGCTGTCGC TTGGAGTAGA CCGGTTCGAT GCCAGTGTCG GCGGGATCGG CGGTTGCCCG TTTGCACCGG GCGCACCCGG CAATATCTGC ACCGAAGACC TGGTGCACAT GCTCCACGAG ATGGGTATCT CGACCGGTAT TCGCCTGCCA GCGCTGCTCG ACGTTGCGCG TATGCTCGAA GGGATGCTGG GGCGCACGGT GCCGGGGCAG ACGATCAAAG CTGGCATCTG CAAGCATTTG CCGCCGGATG GCGCACCGCG TCGGTGA
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Protein sequence | MGKGESHTRG HKEVTMNALP RFPDHVSIRE VGPRDGLQNE DVILTTTQKV QLIDRLADTG LTLIEVGAFV RPANVPQMAD TADVFAAISR RPGVVYSAIV PNAIGARRAV AAQADALQVF LSASESHNRS NVNMSIEQSL AQAADIAAIA REAGVCFEAV VSVAFGCPFE GDVPLDRVMD LTARLFDLGA EQVTFGDTTG MGHPALVRDL VLAFYERFPQ AHPRLHLHSA RGAGLANVLM ALSLGVDRFD ASVGGIGGCP FAPGAPGNIC TEDLVHMLHE MGISTGIRLP ALLDVARMLE GMLGRTVPGQ TIKAGICKHL PPDGAPRR
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