| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4156 |
|---|
| Symbol | |
|---|
| ID | 5211140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5202894 |
|---|
| End bp | 5203853 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640597745 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_001278450 |
|---|
| Protein GI | 148658245 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.128753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGG AAGCGCGTGT TGCCGTTGAA CGCTCCACAC CATTGAGCAT CAGTCCGATC
AATCTGCGCG GCAAGCCACG GTTCGGCGAA AACGTTATAG AGATCATCGT CTTTATTTGT
GGCGCGATTT CTATTTTTAC AACCACAGCA ATCGTTATCG TTCTGTTCCA GGAAGCCTGG
ATGTTCTTTG GTTCGCCAGA GGTTGATCTG GTAGAGTTTT TCGGCACAAC CACCTGGCAG
CCGGAAACCG GTCGCTTCGG TATCTGGCCA TTGATGACAT CGACGCTGAT TACAAGTATC
ATTGCGCTGA TGGTGGCCGT GCCGCTGGGA TTGGGCGCTG CGATCTATTT GAGTGAATAT
GCATCTCCCC AGGCGCGTGG CTACCTCAAG CCGATCCTCG AAGTGCTGGC GGGAGTGCCA
ACCGTGGTTT ACGGCTACTT TGCACTGACA TTCGTGACGC CGGTGATCCT TCAGGGGTTG
CTGGGCAAGG GGAATGTCGA GATCTACAAT ATGCTGTCGG CAGGGTTGAC AATGGGTATC
ATGATCCTGC CGCTGGTCGC ATCGATGAGC GAGGACGCTC TGAGCGCCGT ACCGCGTGCA
TTGCGTGAAG GTGCATATGG TCTTGGCGCA ACCCGCCTCG AGACATCGCT GCGTATCGTG
GTTCCGGCGG CGCTGTCGGG CATCCTGGCA GCGGTGATTG TGGCAATGTC GCGCGCGGTC
GGTGAAACGA TGATCGTTGC ACTGGCAGCC GGCGCCGGAC CCCGCTTTAC CTTCAATCCG
TTGCAGGCAG CCGAAACCAT GACCGGGCAT ATCGCGCGTA TCAGCGGCGG CGACATCAGT
TACGCCAGCA TTCAGTACAC CAGCATTTTC GCCATCGCTC TGGTGCTCTT CTTCATGACG
CTGCTGCTCA ACCTGTTGAG CGGATGGGTT GTGAGTCGCT TCCGGGAGGT GTATGAATGA
|
|---|
| Protein sequence | MEQEARVAVE RSTPLSISPI NLRGKPRFGE NVIEIIVFIC GAISIFTTTA IVIVLFQEAW
MFFGSPEVDL VEFFGTTTWQ PETGRFGIWP LMTSTLITSI IALMVAVPLG LGAAIYLSEY
ASPQARGYLK PILEVLAGVP TVVYGYFALT FVTPVILQGL LGKGNVEIYN MLSAGLTMGI
MILPLVASMS EDALSAVPRA LREGAYGLGA TRLETSLRIV VPAALSGILA AVIVAMSRAV
GETMIVALAA GAGPRFTFNP LQAAETMTGH IARISGGDIS YASIQYTSIF AIALVLFFMT
LLLNLLSGWV VSRFREVYE
|
|---|
| |