| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4067 |
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| Symbol | |
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| ID | 5211050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5096269 |
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| End bp | 5098134 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640597655 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001278361 |
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| Protein GI | 148658156 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAA CCACTGCGCG TCGATGGCCC GGTCGGCGCG CTCTCGTCAC TGCTGTTGGA
CTGGTGCTCA TCGTGGCAGC GTGCGCCGCA GGCGTGTTTT TCCTTCGTGG CGGGCAACAA
ACGCCCGTGC GCTCCTACGG ATTGGTCAAC CCGCGGTTTG ACAGACTGAT CGCAACGGTG
AATGCCACCG GGCAGATCGC CCCCGTTCAG ACAGTCAATC TCAGTTTTGC GGTCACCGGG
CGGGTCGCTG AGGTGCTGGT GCGTCCCGGC GATCCTGTAG AAAAGGGGCA ACCGCTCGCC
CGGCTCGATA CCCGCGAACT GGAATTGCGC CTGGCGCAGG CGGAAGCGCA ACTCGCCCAG
GCGCAGGCAA ATCTCGACCG GTTGCTCGCC GGTCCGTTGT CTGCGGAGAT CGCCGCTGCC
GAAGCGCAAC TCGCCCAGGC TGCCGGGCAA CTGCGGCAGG TCGAAGGAAG CGTGACGGTT
GCGGATATGC GCGCTGCCGA GGAACAACTG CGACAGGCGG AGGCGCGTCT CAACCAGTTG
CTCAACGGTC CGCGCGAGTC GGACGTGCAG ACCGCCGAAG CCCGCATCCG CGAAGCGGAA
TTGAACCTCG AACGTCAGCG CACGCAGCTG TCCACCGCGA AAACCAATGC CCAGATTCAA
CTCGAACAGG CGGTCAATCA GTTGACTCAG GCGCAATCGC GCTATTCGAC GGCAAAGCAA
AACTGGGAGT ATGTGCGTGA AACCGGCGCC GACCCGATTG TGCGCACTGT CGCCGATCCG
AACCGACCGG GGCAAACGCG CCCGAATATT CTGAACGACT CACAGCGCCA GCAATACTAC
GATGCCTTTG TCCAGGCGGA GGCAACGTTA CGCAGTGCTG AAAATGCCGT TGCTCAGGCG
CAGGTGAACT ACGACAATGC GCGTCTGGCA GAGGCGAACG GCGTCGAACT CGCCGAGGGG
CAACTCGCGG TTGCGCGCGC CAATCGTGAT CTCCTCTTTG CCACTCCTGA GCCGGATGTG
CTGGCTGCGG CGCGTGCGCA GGTCGCCAGC GCGCGGGCTG CACTCGACCG GATGCGCGGC
GATCAGCGCG GCGGTCAGCT TGAAGCCGCG CGCGCCGCCT TCGAAGCCGC AAAGGCGAAT
CTGGAACGGT TGCGCGCCGA TCCACGCCCG GCAGACCTGG CGGCAGCCCG CGCTCAGGTG
GACGCTGCGC GAGCGGCGCG CGATCTGGCG CGACTGACGC TCGACGAAGC AGTGCTCAAA
GCGCCGTTCA ACGGCGTCGT TGCCGAGGTG AACCTGAAAG TCGGCGAAGC GCCGTCGCCG
GGACGCCCTG CCATCGTCCT GGCAAACCTG GAACGCTTCT ACGTGGACGT AACGGTGGAC
GAGATCGATA TCATCCGGGT GAGCGTCGGT CAACCGGTGA CGCTGACACT CGATGCGCTG
CCGGAAGTGA CCCTTGCGGC GACGGTCGAG ACGATTGGAC CGCTGGCGCT GCCGCAGGCT
GCGGTAACAT CGTACCAGGT GCGGATCGGG ATTCCCAACA CCGATCCGCG CGTGCGCGCC
GGGATGTCGG TGGGGGCGGA TATCGTCGTT GCGGAGCGCG ACAATGTGCT GCTTGTGCCG
CGCCGCGCCG TGCGCAGCGA CCGCGGTCGT CTGCTGGTTG ATGTGGTGCG TGATCCTGGA
TTGTGTGCGC TGCCGCCGGA GCAACGTCCG GCGCGTCCGG ATCTTGAAGC GCGTGAGGTG
ACGGTCGGCT TGAGCAACGA CCAGGTTATC GAAATCGTCA GCGGTCTCGA TCCGCAAGCC
TGTGTCTATG TCGAAGGGGT GGATCAGCGC TTCACATTCT TTACCGGACC GCCGCGCACG
CGCTGA
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| Protein sequence | MATTTARRWP GRRALVTAVG LVLIVAACAA GVFFLRGGQQ TPVRSYGLVN PRFDRLIATV
NATGQIAPVQ TVNLSFAVTG RVAEVLVRPG DPVEKGQPLA RLDTRELELR LAQAEAQLAQ
AQANLDRLLA GPLSAEIAAA EAQLAQAAGQ LRQVEGSVTV ADMRAAEEQL RQAEARLNQL
LNGPRESDVQ TAEARIREAE LNLERQRTQL STAKTNAQIQ LEQAVNQLTQ AQSRYSTAKQ
NWEYVRETGA DPIVRTVADP NRPGQTRPNI LNDSQRQQYY DAFVQAEATL RSAENAVAQA
QVNYDNARLA EANGVELAEG QLAVARANRD LLFATPEPDV LAAARAQVAS ARAALDRMRG
DQRGGQLEAA RAAFEAAKAN LERLRADPRP ADLAAARAQV DAARAARDLA RLTLDEAVLK
APFNGVVAEV NLKVGEAPSP GRPAIVLANL ERFYVDVTVD EIDIIRVSVG QPVTLTLDAL
PEVTLAATVE TIGPLALPQA AVTSYQVRIG IPNTDPRVRA GMSVGADIVV AERDNVLLVP
RRAVRSDRGR LLVDVVRDPG LCALPPEQRP ARPDLEAREV TVGLSNDQVI EIVSGLDPQA
CVYVEGVDQR FTFFTGPPRT R
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