| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4024 |
|---|
| Symbol | |
|---|
| ID | 5211007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5035653 |
|---|
| End bp | 5036858 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640597613 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_001278319 |
|---|
| Protein GI | 148658114 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGCG ATAACCCGTC TTCTTTTGAT CCCGCTCAGG AAAGGTTGCG CCGCTGGCGT
CTCATCCTGG GCGGCGAGGC GGATGGCACC GGCTTTTCTC TGAGCAACGA AACCGACCTG
GGTATGGATC AAGCGCTGGC CGCGCTCTAT TCCCGCGCCG AACAGAAGGG GCGAGGCGGA
TTAAGCGCTT CCGCTCCCCA CGTGGCGCGC TGGTTGGGAG ATATTCGCAC GTATTTTCCC
GCCCCGGTTG TCCATATCAT GCAAAAAGAC GCCCTGGAAC GGCTCAACCT GCGTCAAATG
CTACTCCAAC CCGAAATGCT GGAAGCCGTC ACCCCCGATA TTCATCTCGT TTCAACCATC
CTTTCACTCA GCAAAGTTAT CCCCGAACAG ACCAGACACA CCGCCCGTCA GTTGGTGCGC
GCCCTGGTCG AACAACTGGA GAAAAAACTG GAAGGACCCC TGCGCCAGGC TATTAGCGGC
GCTCTCCACC GCGCTGCTCA TCATCGCCGT CCGCGCTACG CCGACATGGA CTGGAATCGC
ACCATCCGCG CCAACTTGAA GCACTACCAA CCGAATTACA AGACCATCAT CCCCGAAAGA
CGCATTGGCT ATGAGCGCCG AAAGTCGGCC TCCAGATTGC GCGACATCAT TCTGTGCGTG
GATCAGAGCG GCTCCATGGC TTCCTCAGTG GTTTATGCCT CGATCTATGC GGCAGTCATG
GCCTCGCTCC CGGCTATTAA GACCTCATTG GTATTGTTCG ACACAGCAGT CATAGATCTG
ACTCCTGAAT TGCACGACCC GGTGGACGTA TTGTTTGGCG CCCAGCTGGG GGGTGGAACA
GATATCGGGC AAGCCTTGAC CTATTGTCAG AGCCTTATCC ACGTCCCGAA CGACACCATT
TTGATCCTCA TCAGTGACCT GTACGAAGGC GGTCATCCTG ATCGTCTCCT GCGCCATGCA
GCTTCACTGG TCAATGCTGG CGTCCAGGTC ATCACCCTGC TGGCTCTCAG CGACGAGGGC
CGCCCTTCTT TCCATCACCA GATTGCCGCC AGACTGGTTG CACTCGGCAT CCCTTGTTTT
GCCTGCACTC CTGATCAGTT TCCCGGTCTG ATGGCTGCAG CCATCAAACG GGAAGACCTG
CACGAATGGG CGGCAGGTGA AGGAATAGTC GCCGTTCGCG CCGGAGGCAC CCCGTTTTCG
AGCTAG
|
|---|
| Protein sequence | MRSDNPSSFD PAQERLRRWR LILGGEADGT GFSLSNETDL GMDQALAALY SRAEQKGRGG
LSASAPHVAR WLGDIRTYFP APVVHIMQKD ALERLNLRQM LLQPEMLEAV TPDIHLVSTI
LSLSKVIPEQ TRHTARQLVR ALVEQLEKKL EGPLRQAISG ALHRAAHHRR PRYADMDWNR
TIRANLKHYQ PNYKTIIPER RIGYERRKSA SRLRDIILCV DQSGSMASSV VYASIYAAVM
ASLPAIKTSL VLFDTAVIDL TPELHDPVDV LFGAQLGGGT DIGQALTYCQ SLIHVPNDTI
LILISDLYEG GHPDRLLRHA ASLVNAGVQV ITLLALSDEG RPSFHHQIAA RLVALGIPCF
ACTPDQFPGL MAAAIKREDL HEWAAGEGIV AVRAGGTPFS S
|
|---|
| |