Gene RoseRS_3992 details

Gene Information

• Locus tag: RoseRS_3992
• ID: 5210975
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Roseiflexus sp. RS-1
• Kingdom: Bacteria
• Replicon accession: NC_009523
• Strand: +
• Start bp: 4993965
• End bp: 4995908
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640597583
• Product: hypothetical protein
• Protein accession: YP_001278289
• Protein GI: 148658084

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAATCGA CCTTTTCGCC GGATACCTCA CGGATTGCGG AGAGAGCGGC GCATCGGCGC 
ACGCCGCTCG CCGCTTTTTT GTTTCTGCTC GCGCTCTACC TGCTGACGGC GAGCGGTCAT 
CTCTATTCGC CCGACGAAGA GGCGATGTAC TATGTGACAC GCGGACTGGC GACACGCGGC 
GACATCGCTA TCGAGGGGGA CGATCTCGTG CCGATGCCGT TGCGGGAAGG GCGCGATGGA 
CGCATGGTTT CGCCGTATGG CATCCTTCCT TCGCTGGCGG CGTTGCCATT CTTCGCCCTC 
GGCGCGCTGC TGGCTGGCGG TGCGTCGGTC GAGGTCTACG AGTACCTCAC CCGTTTCACG 
GTCAGTCTGC TGAATGCACC GGTGACTGCT GCTACCGGTG CGGTTCTGTT CTCATGTGTG 
GTATCTCTGG GGTATGGCAG GCGGGCAGCA TGGCTGGCAG CGGGTGCGTT CGGCGTGGCG 
AGCCTGGCGT GGCCCTATGC CCGCACCTTC TTCTCCGAGC CACTGGCGGG ACTCCTGCTG 
ATCCTGGCGG TCGAACGGGC GTACAGCGCG TCCGTGCGTC ACAACCGACG AGCGCTGCTG 
ATCTCCGGCG TTGCGACCGG TTTGCTGCTC GTCACGCGCA TCGCTGCGCT GGTTGCTGTG 
CCGTTTTTGA TGTTGTATGT GGCGGCAGCA ACGGTTTCCT GCCCGGGTGC GTCGCGTGGA 
ATGGTGGAGC GACTCCGTGT GATGGCGGCG CACCTGGGTC TGTGGAGTTT GGGGTTGGTT 
CCCGGTGTGG CGCTGGTTAT CGGCTACAAT CTGGCGCGCT TTGGTGTACC GCTGGCGAGC 
GGCTATGGCG ATGAAGCGAG CGCTTTTACC ACACCGCTGC TGACTGGATT GACCGGGTTG 
TTGCTCAGTC CTGGCAAAAG CCTGTTCCTG TACGCGCCGG TTGCGGCGCT GGCGCTGGCG 
GGCGCGCCGT TGCTGTGGCA GCGCTGGCGT CTGGAAACAG CGCTGCTGCT GCTGCTGGTC 
ATTGTGCATG TGGTGCTGTA TGCGCGCTGG CATGCCTGGG ATGGCGGCGG GGTTTGGGGA 
CCCCGATTGC TGCTGCCGAT CGTGCCGTTG TTGGCGGTGC TGGCAACGCC GGTGTTCGAG 
CGCGCAGCCG CAGGTGGCGG CATCGGGATA CGCCTTATCG TCAGCGCGAT CCTGGTGTTT 
GGAACAATCA ATGCACTGGC AGGCGTTCTC GTCAACCCGG CGATCTACCT CAATATGGAG 
ATTCCGCACC GCCGGATCTA TTTCGAGGCG GCACACTCGC CATTGCTGGC GCACTGGCGC 
ATTGCGGCGG AACGCTGGCA GGCGCGGTAT GGCGGCGGGC AATGCGTGAT CGGCGACGGG 
TTTTACTTCC CGGAGATGCG CGATGCGCTA CTGCCGCGCA TGACCGGCGC ATACGGAACA 
CTATCCTGCC GGAGCGACAG ACCGACACTG CTCACACTCC GCATCAACGA TGATCGTCCG 
ACCGGCGCGC CGCCGGGTAA CCCGACGCTC GACATCGCCG GTCGTCAGGT TGCGTTGCGT 
GATGGCCAGG GAAGCCTGTT CTATGTGCTT GCACCGCCGG GCGCACTGCT GGTACTGCGG 
GCGCAGCCGT TTGTGCAGAC GATACCGGGA ACGGAGCGGC AGCGAATGGT CGGGTTGCGG 
ATCGATGCGA TCACCGCCGT CGATGACCGT GGCATTCGAT TGCCGCTCTC TGATGCAGCC 
ATCGAACCGC CGCCGGCAAG TCCGCGCTAC CGCTGGGGGT GGTATTTCGT TCCAACCGTT 
CGCCACACGA CCGACCTGTG GATCGGGTAT CTGCTGCGCA GCGAGATCGG TTTCATTCGT 
GCGCTGGCTG TCGCCGGGTT GCTGGTCAGT ACGGCGCTGG CGGCAGGTGT GGCGGGGGGG 
AGGAGGTTGG GCGTTGAACG TTGA 

 

Protein sequence

MQSTFSPDTS RIAERAAHRR TPLAAFLFLL ALYLLTASGH LYSPDEEAMY YVTRGLATRG 
DIAIEGDDLV PMPLREGRDG RMVSPYGILP SLAALPFFAL GALLAGGASV EVYEYLTRFT 
VSLLNAPVTA ATGAVLFSCV VSLGYGRRAA WLAAGAFGVA SLAWPYARTF FSEPLAGLLL 
ILAVERAYSA SVRHNRRALL ISGVATGLLL VTRIAALVAV PFLMLYVAAA TVSCPGASRG 
MVERLRVMAA HLGLWSLGLV PGVALVIGYN LARFGVPLAS GYGDEASAFT TPLLTGLTGL 
LLSPGKSLFL YAPVAALALA GAPLLWQRWR LETALLLLLV IVHVVLYARW HAWDGGGVWG 
PRLLLPIVPL LAVLATPVFE RAAAGGGIGI RLIVSAILVF GTINALAGVL VNPAIYLNME 
IPHRRIYFEA AHSPLLAHWR IAAERWQARY GGGQCVIGDG FYFPEMRDAL LPRMTGAYGT 
LSCRSDRPTL LTLRINDDRP TGAPPGNPTL DIAGRQVALR DGQGSLFYVL APPGALLVLR 
AQPFVQTIPG TERQRMVGLR IDAITAVDDR GIRLPLSDAA IEPPPASPRY RWGWYFVPTV 
RHTTDLWIGY LLRSEIGFIR ALAVAGLLVS TALAAGVAGG RRLGVER