| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3963 |
|---|
| Symbol | |
|---|
| ID | 5210947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4962410 |
|---|
| End bp | 4963228 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640597557 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001278263 |
|---|
| Protein GI | 148658058 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.312464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGC CAGACTATCT CCTGATCGGG CATATGACCC GCGACCTGCT GCCTGATGGC
GGGTTTGCGC CGGGTGGCAC CGCGCTCTAC GCCGCCCTCA CGGCGCATCG GTTGGGGCGG
CGGGTGGGTG TCGTCTCGGC GCAGGCGACG ATCCCCGGCG ATTGGGATGG CGGTATCGAG
GTGGCGTTCG TTCCGACGAT GGAAACGCCG GTGTTCGAGA ATCGCTACAC CCCGCAGGGG
CGAGTGCAGA CGCTGCACGC CGTCTCCAGC GTGCTGACGA TCGAGCACGT GCCGCCTGCC
TGGCGTGCGG CGCGCATTGT GCATCTTGCG CCGATCCTGG CGGAGACTCC CGAACCACTG
GTGGATGCGT TCCCTGGTGC GCTCCTGGGC ATGACGCCGC AGGGCATGAT GCGCGCCTGG
CGTGCGCCGC TTCCGGCGCG CATTACGTAC CGACCCTGGA CGCCGTCGCC GCGTCTGCTC
GAGCGGATCG ATGCGTTGAT CATGAGCATC GAAGATCTCC AGTTCGACGA GGAACGCGCA
CGCGCCTATG CGCGCCACTG CCGGCTGGTG GCGCTGACCC GCGGCGCGGC AGGGGCGACG
CTGTTTCTCA ATGGTCAGCC GCACCACATC GAGGCGTGCC CGGCGATTGA GCGCGATCCA
ACCGGCGCCG GTGATGTTTT CGCCGCTGCG CTGCTGGTGC GCCTGGATGA AACCGGCGAT
CCACTCGAAG CGGCGCATTT CGCCGCATGC ATCGCCGCAC GGAGCGTCGA AGGGGTCGGA
CCGGGCGCGA TCCCCTGGCG GAAGGAGATT GACCGATGA
|
|---|
| Protein sequence | MQTPDYLLIG HMTRDLLPDG GFAPGGTALY AALTAHRLGR RVGVVSAQAT IPGDWDGGIE
VAFVPTMETP VFENRYTPQG RVQTLHAVSS VLTIEHVPPA WRAARIVHLA PILAETPEPL
VDAFPGALLG MTPQGMMRAW RAPLPARITY RPWTPSPRLL ERIDALIMSI EDLQFDEERA
RAYARHCRLV ALTRGAAGAT LFLNGQPHHI EACPAIERDP TGAGDVFAAA LLVRLDETGD
PLEAAHFAAC IAARSVEGVG PGAIPWRKEI DR
|
|---|
| |