Gene RoseRS_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3889 
Symbol 
ID5210871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4870694 
End bp4871284 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID640597484 
Producthypothetical protein 
Protein accessionYP_001278192 
Protein GI148657987 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATC GGCGCCAGAT CACCATCGCA GGGACAACGC TGACAGTGCT TATCGAACGC 
AAAGCGGTCA AGAACATCAA TGCCCGTCTC CGTGATACAA CGCTGCACAT CAGCGCACCG
CACGCAGTCG ACGATACGGC GCTTGATCGG GCAATCATCG AACTCGCGCG CCGCCTGATT
CAGCGCGTTC ATAAGCGGCA GATCAACAAC GAAGAAGATG CGCTGGCGCT GGTACGCCAG
GTTGCCGCGC GCTTTCCCAA CCCGCCGGTC ATCGAGCACG CAACGTTTAC CCTCACCGAA
GCGCGCTGGG GGAGTTACAG CGCCGCTACC GGCACAGTGC GCTTGAACGC GACGCTCCTG
CGCATGCCGC GCTGGGTGCT CGAAGCGGTT GCCGCCCACG AAATCGCGCA TGCCTTCCAT
CCCAACCATT CGCCAGCATT CTGGCGTCTC CTCCGCAGCG TCTGCCCTGA TACTGATCGC
GCGCAGGCGT TTCTCGCCGC AGTCGCCTGG ATGGCGCGTT CGTGGGACGG TATGCCGCCG
GTGGAACGCG CGCTGCTGGC GCAGGTGCAC GACGAGGTCG GTGACGTGTG A
 
Protein sequence
MADRRQITIA GTTLTVLIER KAVKNINARL RDTTLHISAP HAVDDTALDR AIIELARRLI 
QRVHKRQINN EEDALALVRQ VAARFPNPPV IEHATFTLTE ARWGSYSAAT GTVRLNATLL
RMPRWVLEAV AAHEIAHAFH PNHSPAFWRL LRSVCPDTDR AQAFLAAVAW MARSWDGMPP
VERALLAQVH DEVGDV