| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3888 |
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| Symbol | |
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| ID | 5210870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4869400 |
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| End bp | 4870683 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597483 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001278191 |
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| Protein GI | 148657986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGC TGTCCCGCTG GCGCACCGGA CATGCTCAGC CAGCAGACAT CCAGAAGCAG
AATGAACGGA GCGTCCTGAT CGATGGCCTG GGGGTCGGCA TCGTCACCGG CGTTTCAACC
TTCCTCAGCG TCTTCCTGAC CCGCCTGGGC GCATCTCCGT TCCTGGTCGG ACTGCTCACC
GCACTCCCCG CGCTGACCGG CATGCTCCTC GCCATTCCTG CCGGGCGGTT CCTTGAACGC
CAGCGCAACA TGGCGCCCTG GTACTCGTGG CCCCGCGCAA TGGTGCAGGG ATCGTTCGTT
TTGATGGGGT TGATTCCCTT CTTCGTCAGC CAGCAGATCA CGGTGTATGC TGTCATTGTC
ATCTGGGCGC TGGTCACGAT CCCGCAGACG ATTGTCAATA TTACTTTCAC CGTGGTTATG
GGCGCGGTTG CAGGACCCCG CCGACGTCAG TATCTGATGA GTCGCCGCTG GTCGGTGCTT
GGCGCAACTA CGGCGATCAC TGTCGCTGCG ATCGGCGCGT TTCTCGACAA CGTCCCATTC
CCGCTCAACT ACCAGATCGT CTTTATCGCA TCGTTTGTCG GCGGGGCGCT GAGTTTCTTT
TTCTCCCGAC GATTGACGAT TCCGGACAAT CCGCCGCCCC AACGTGATGT TGTCCAGCAA
TCGTTAGGCG CGTATCTCAG CGATATGCTG GCAGTGTTGC GTGAACCATC GCCGTTCAGC
CGGTTTGTCA TCAGTGCATT CGTGTTCAAC CTGGGCATGA TGATGGCGCT GCCGCTCTTT
CCGCTCTACT GGGTGCGCCA GCTCAACGCC TCCGATTTCT GGATCGGCTT GATCAATACG
ACCAACAACG GCGTGTTGCT GGTCGCCTAT TTTATCTGGA CGGCGCTCAC CCGCCGCAAG
GGGAACGTGC TGGCGCTCCG AATCTGTGTG TTCGGACTGG TGCTGTATCC GCTGTTGACT
GCGCTGACGC CGCGAGTCGA ACCGCTGGTG TTCTACGCGG CGCTGGCGGG CATCTTCGGC
GCGGGGTTAA ACCTGGTGTT GTTCGATATT TCACTTTCCA CCGCGCCGCC TGAGCGCACA
GCGGCATATA TCGCGCTGTA CCAGTTGACG ACCTACATCG CAACGCTGGT GGCGCCACTG
GTCGGCACTC TCCTGGCAGA CCTGTTCGGA TACACGCCGG CGCTGCTCAC CGGAGCTGCA
TTCCGTCTTG CTGGCGCGAT CCTTTTTGTA TGGTTAGGCG TTGGCGTCAC TTCCGAGCGT
CCACGCGCGG TGCAAACTGC ATGA
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| Protein sequence | MPTLSRWRTG HAQPADIQKQ NERSVLIDGL GVGIVTGVST FLSVFLTRLG ASPFLVGLLT
ALPALTGMLL AIPAGRFLER QRNMAPWYSW PRAMVQGSFV LMGLIPFFVS QQITVYAVIV
IWALVTIPQT IVNITFTVVM GAVAGPRRRQ YLMSRRWSVL GATTAITVAA IGAFLDNVPF
PLNYQIVFIA SFVGGALSFF FSRRLTIPDN PPPQRDVVQQ SLGAYLSDML AVLREPSPFS
RFVISAFVFN LGMMMALPLF PLYWVRQLNA SDFWIGLINT TNNGVLLVAY FIWTALTRRK
GNVLALRICV FGLVLYPLLT ALTPRVEPLV FYAALAGIFG AGLNLVLFDI SLSTAPPERT
AAYIALYQLT TYIATLVAPL VGTLLADLFG YTPALLTGAA FRLAGAILFV WLGVGVTSER
PRAVQTA
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