| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3851 |
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| Symbol | |
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| ID | 5210833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4811094 |
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| End bp | 4812473 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640597446 |
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| Product | winged helix family two component response transcriptional regulator |
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| Protein accession | YP_001278154 |
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| Protein GI | 148657949 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000011796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCGCAGA ACGCAGGCGT GCGTATGAAC CCATTCGGCA ACCGCAAACC GGTGATCGAT
CCTCGTCTCT TTATCGGGCG GCGCAGTCTC ATCGACGCAG TCTGCGAGCG TCTGACGGCT
GCGCCGCCGC AGTGCTGCGC CGTGGTTGGC GATGCGCGGA GCGGGAAGAC TTCGCTGCTC
TACTACCTGC GCAGTTCGAC GGCAGCACGC CCAATCTGCG CCGACGCGAC ACGGTTTGTC
TTCCCCTACG TCAACGCGGG TCCCTATGCC GATCTCGGCG CTTCTCAGAG CCACGGCGCC
CTCTATTTCT GGCGTGATCT GGCGCGCGCC ACAGCGCAGG CGCTCGCCCT GCCCGACGAT
CTCCCCACCC TTCCCGATCA GGGCATCGCC GAAGCGGCCA TTGTTGATAC GGTGTATGCT
CTTAAGTGCA CGGTCGAAGA CATCATCCGT CGCACGGGGG ATCACACCTT CATTTTCCTG
ATTGACAATG TGGAAGGCAT CGCGCGCCTG CCGCGCCACA CGGCAAGTTT CCTGCGCTCG
CTGACGCAGG ACCCCGACAT TGGCGATCGT GTCGCTTATG TCGTCACTTC CAGTACACCA
TTGAGTCGTC TCTACCCGGT GAGCGAGTTA CGCGAGCCGT CCTCCTTCTG GGGGTTGTTC
GCCAGCGAGC TGTTCATTGG GGGGCTTGAT GACGCCGACA TTGCTGCGCT GCTCGGACGT
GCGCCAGAGT TGAATGACGC TGATCGCGCC TGGATCCGAC GGCTTGGCGG CGCCAATCTG
ACGTTGATCC TGATCGCCGC CGCGCACGTG TACGAGTGGC GGCTCCATCC GACCGGCAGC
CCCGATGACG TCGAACGCGC CGCCATCGAA GAGGCGCGCC CGCTCTGCCG CTCCTGGTGG
CGCGAGTTGA CCGAGACGCA TACAGCGTCC GTCGACGCGC GCCAGTCGCT GATCGATCAG
AACCGTGCGC CAACCCCCGA CGAGGCTGCG ATCTTCGAGG CGCTCCACGC CCGTGGGCTG
GCGCAGCGCG ACCGGCACGG CTGGCGTATC GCTTCGACCA TCTTCGCCCA GGCGCTGTCG
GATCAACCGG ACAGGCCCTC GACGTCGCTT CCACCGCCGC CCGCCGCAGC GCCGGCAACG
CCGCCCGCCT TTACCCACCT CGAAGGGGAG GTCTATGCGT TCCTGCGCGA AAACGCCGGG
CGCGTCTGCA CCCGCGATGA AGTCAAACGC GCTATCTGGC CCGTCTCCCC GCCGTCTGAC
AGTGCGCTGC AGAAGATTAT CGAGCGCATC CGCGACAAGA TCGAACCCGA CCCCAAACAT
CCCCGCAAAT TGATCGCCGT GCGTGGCCAG GGATATATGC TGCGCCGCGA TACCGATTGA
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| Protein sequence | MSQNAGVRMN PFGNRKPVID PRLFIGRRSL IDAVCERLTA APPQCCAVVG DARSGKTSLL
YYLRSSTAAR PICADATRFV FPYVNAGPYA DLGASQSHGA LYFWRDLARA TAQALALPDD
LPTLPDQGIA EAAIVDTVYA LKCTVEDIIR RTGDHTFIFL IDNVEGIARL PRHTASFLRS
LTQDPDIGDR VAYVVTSSTP LSRLYPVSEL REPSSFWGLF ASELFIGGLD DADIAALLGR
APELNDADRA WIRRLGGANL TLILIAAAHV YEWRLHPTGS PDDVERAAIE EARPLCRSWW
RELTETHTAS VDARQSLIDQ NRAPTPDEAA IFEALHARGL AQRDRHGWRI ASTIFAQALS
DQPDRPSTSL PPPPAAAPAT PPAFTHLEGE VYAFLRENAG RVCTRDEVKR AIWPVSPPSD
SALQKIIERI RDKIEPDPKH PRKLIAVRGQ GYMLRRDTD
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