Gene RoseRS_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3831 
Symbol 
ID5210813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4791452 
End bp4792162 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content56% 
IMG OID640597427 
ProductABC-2 type transporter 
Protein accessionYP_001278135 
Protein GI148657930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.51179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000860336 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGCT TCGCTCATAC CCTGTACTGG GACATGGTTC GCCAGTACCG TAACGGCTTC 
TATCTGGTCT CGGCTTTTGT CGTGGTACTG ATGGCGCTTG TGTTGCGTCA AATCGGTGAA
GTGGACTGGT CGATCTGGTG GCCGCCCCTT CTGCTTGAAA ACCTGGTGAT CAACGCCTTC
TACTTTATGG CAGGCATCGT TCTGCTCGAA AAAAGTGAAG GCGTGCTCGA AGCCCAAATT
GTGACCCCTC TGCGCGATCA GGAGTACCTG CTTGCCAAAG TCGTCAGTCT GTTCGTGCTT
TCGGTGATTG AGTCGCTGGC GCTGATCCTG ATCGTCAGCG GACCCGCGTT CAACTGGTTC
TGGATGCTGC TGGGTATTGC CGGTTTCGTG GCGCTCTATG CGTTCTACGG CTTTTTCGTC
GTCTCACGCT ACGACTCCAT CACGGAATTC TTGATGCCTT CCGCGCTGTG GACGCTGGGA
TTCTCGCTGC CCCTGCTCTC CTATTTCGAT CTGTGGCGAC ACTGGAGTCT CTATCTGCAC
CCGTTGCAGG CGCCGCTGTT GCTGATCCAC GCCGCCTATA CGCCCCTGCC TGCCTGGCAG
ATGGCGTATG CTATCCTGTA CACTGCTCTA TGGGTCGGCA TTGGCGCTAT TGCCGGTCAG
CGCGCTTTTT ATCGCTTCGT GATAGCGAAG GAAGGAGTTC GAAAACCATG A
 
Protein sequence
MKRFAHTLYW DMVRQYRNGF YLVSAFVVVL MALVLRQIGE VDWSIWWPPL LLENLVINAF 
YFMAGIVLLE KSEGVLEAQI VTPLRDQEYL LAKVVSLFVL SVIESLALIL IVSGPAFNWF
WMLLGIAGFV ALYAFYGFFV VSRYDSITEF LMPSALWTLG FSLPLLSYFD LWRHWSLYLH
PLQAPLLLIH AAYTPLPAWQ MAYAILYTAL WVGIGAIAGQ RAFYRFVIAK EGVRKP