Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3831 |
Symbol | |
ID | 5210813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4791452 |
End bp | 4792162 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640597427 |
Product | ABC-2 type transporter |
Protein accession | YP_001278135 |
Protein GI | 148657930 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.51179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000860336 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGCT TCGCTCATAC CCTGTACTGG GACATGGTTC GCCAGTACCG TAACGGCTTC TATCTGGTCT CGGCTTTTGT CGTGGTACTG ATGGCGCTTG TGTTGCGTCA AATCGGTGAA GTGGACTGGT CGATCTGGTG GCCGCCCCTT CTGCTTGAAA ACCTGGTGAT CAACGCCTTC TACTTTATGG CAGGCATCGT TCTGCTCGAA AAAAGTGAAG GCGTGCTCGA AGCCCAAATT GTGACCCCTC TGCGCGATCA GGAGTACCTG CTTGCCAAAG TCGTCAGTCT GTTCGTGCTT TCGGTGATTG AGTCGCTGGC GCTGATCCTG ATCGTCAGCG GACCCGCGTT CAACTGGTTC TGGATGCTGC TGGGTATTGC CGGTTTCGTG GCGCTCTATG CGTTCTACGG CTTTTTCGTC GTCTCACGCT ACGACTCCAT CACGGAATTC TTGATGCCTT CCGCGCTGTG GACGCTGGGA TTCTCGCTGC CCCTGCTCTC CTATTTCGAT CTGTGGCGAC ACTGGAGTCT CTATCTGCAC CCGTTGCAGG CGCCGCTGTT GCTGATCCAC GCCGCCTATA CGCCCCTGCC TGCCTGGCAG ATGGCGTATG CTATCCTGTA CACTGCTCTA TGGGTCGGCA TTGGCGCTAT TGCCGGTCAG CGCGCTTTTT ATCGCTTCGT GATAGCGAAG GAAGGAGTTC GAAAACCATG A
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Protein sequence | MKRFAHTLYW DMVRQYRNGF YLVSAFVVVL MALVLRQIGE VDWSIWWPPL LLENLVINAF YFMAGIVLLE KSEGVLEAQI VTPLRDQEYL LAKVVSLFVL SVIESLALIL IVSGPAFNWF WMLLGIAGFV ALYAFYGFFV VSRYDSITEF LMPSALWTLG FSLPLLSYFD LWRHWSLYLH PLQAPLLLIH AAYTPLPAWQ MAYAILYTAL WVGIGAIAGQ RAFYRFVIAK EGVRKP
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