Gene RoseRS_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3825 
Symbol 
ID5210807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4786026 
End bp4786796 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID640597421 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001278129 
Protein GI148657924 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000788049 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTTC ACATCACGCA TAACGGACCG ATCGCTACGG TCACGCTTGA TCGTCCTGAA 
GTACATAACG CCTTCGATGC CGCCATGATC GTGGAGATGC GGGCAGCGTT CGACGCCCTC
TCCGGTGACG AACATGTGCG TGTCATCGTC CTGACCGGCG CAGGCGAGTC GTTCTGCGCT
GGCGGCGATA TGCGCTGGAT GCAGAGCGCG ATGGAGCTGA CCTTCGAGGA CAATATGGCG
GACGCCAGCG CGCTGGCGGC GATGTTCGAG ACTATCTGGA CATGCCCGAA GGTGGTGCTT
GGTCGGATCA ACGGTGCCGC CATCGGCGGC GGCGCAGGAC TGGCCGCCTG CTGCGACCTG
GCGATAGCCG CCGACACGGC GCGTTTCGGT TTCGGCGAAG TCAAAATCGG ACTGGTACCG
GCGGTCATCG CGCAGTACGT TGTTCCCAAG ATCGGCGTCA GCCAGGCGCG CGCGCTCTTC
GTCTCCGGCG AACGCTTCAG CGCCGAACGC GCCTTCGAGA TCGGGTTGAT CCACGGCGTC
GTGCCGCCGG AAGAACTCGA CGCCACGGTG ATGGAGATCG CACAGCGCTG CCTGACGAGC
GCACCCGACG CCATCACAAC CATCAAGCGG GTGGTAGACG TGGTATGGGA GAGCGAACGC
CTTGCCGCAC AGCGTTTCGT CGTCGAAATG CTGGCACGGG TGCGCACCGG CAACGAGGCA
CGCGAGGGAA TCGCCGCCTT CAAAGCGCGG CGGCGACCGC CGTGGGCGTG A
 
Protein sequence
MTLHITHNGP IATVTLDRPE VHNAFDAAMI VEMRAAFDAL SGDEHVRVIV LTGAGESFCA 
GGDMRWMQSA MELTFEDNMA DASALAAMFE TIWTCPKVVL GRINGAAIGG GAGLAACCDL
AIAADTARFG FGEVKIGLVP AVIAQYVVPK IGVSQARALF VSGERFSAER AFEIGLIHGV
VPPEELDATV MEIAQRCLTS APDAITTIKR VVDVVWESER LAAQRFVVEM LARVRTGNEA
REGIAAFKAR RRPPWA