| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3727 |
|---|
| Symbol | |
|---|
| ID | 5210708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4664228 |
|---|
| End bp | 4664731 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640597322 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001278031 |
|---|
| Protein GI | 148657826 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00887093 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC GCGTGCTCGA AAATCTGCGT AAAGTCGAGA TCTTTGCCGG TTTGAGCGAC
GATGAACTGA TGCAGGTTGC GGGAGTGTGC AGAGCGATCC GCACGCCTGC GAGCCAGACG
GTTTTCAATG AAGGCGACAC CGGCGACGAG TTGTACATCG TGCACGAAGG TACGGTGCGC
GTCATGATCA CAACGCGCCT GTCGGATGGG ACGGTAGCGC CATCGACGAT CAACACCCTG
TATCCGGGTC AGTGTTTTGG CGAGCAGGCA TTGCTCGGCG GTGCAGCGCG CACCGCAACG
GTGATGACGA ATGAACCGAC GGTGCTGATC GTTATTCGGG CGCTGGATTT TGATGCGCTG
GCGGAACGCA GCCCGCGGAT CGGCTTCGTT GTGATGCGCA ATCTGGCGCG CGACCTGGCG
TATAAACTCA ATGCGTCCAA CCTGCTGTTG CGTGGCAACA TCCGCTGGCG TGGCGATGAA
TTGGGAAAGC GGATGGGCGG GTAA
|
|---|
| Protein sequence | MNPRVLENLR KVEIFAGLSD DELMQVAGVC RAIRTPASQT VFNEGDTGDE LYIVHEGTVR
VMITTRLSDG TVAPSTINTL YPGQCFGEQA LLGGAARTAT VMTNEPTVLI VIRALDFDAL
AERSPRIGFV VMRNLARDLA YKLNASNLLL RGNIRWRGDE LGKRMGG
|
|---|
| |