| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3500 |
|---|
| Symbol | |
|---|
| ID | 5210477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4390456 |
|---|
| End bp | 4391760 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640597095 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277808 |
|---|
| Protein GI | 148657603 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTC ATCAACAGAC ATATCGCCTT TACCTGGGCG CCAATCAGGT AACTACCGTT
ACGCTGCGCA CTGATGAACC GCTCTACCGG ATCGTCGAGC GCCTGGTGAT TGAGCACGGC
CTGCCGGTGG TCGATCAGTA CGGACAACCC ATCACCTATG CCCTCTACGC GGGGCAGATC
CGCCGGTTGA GCAATGAGAT GACGCTGAGG CAGGCAGGCT ACGATCAGGG TGGCGACCTC
TATCTGGCGA ATATCTATGC GCCGTGGTGG GAAGGCATTC CCGCCGTCAC CCGGCGCTTC
GGCGACGATC CACCCGCACC AAACGCCCGT CGCATTCCCT ATGCGCTGGT TGGCATCGGC
GCTGCCGTTG CGCTGATGGT GGTTATCGGC GGCGTCCTGC TATTTACTAT CTTTTCAGGA
AGGACGGGGA CGGCTGCGCA AACGTCCGCC CTGGCGCAGC AACCGGCGCA AGGCGCCACG
CAACGTTCCA ATCCCACGGC AACGCTGGCG CCGGCGCCGA CGCGCCAGAA CACGCCCCAG
TCAGCGCCTC CGACAGCGAC GCTGGCGTCA ACGCCACAAC CGATGACGGG ATTGCCGACT
GCGACGCTGG CGTCGATACC GCAACTGACG ACGGCATTGC CCACCGCGAC TCTGGCATCG
CCAGGAAACA CGGTTGCCGT CTTGCTTCCG GCTGGCGCCG AAGAAGCCAG CGTTGCCGGT
GTCAAACGCG AGTACCTCAA CCGGGACAAC CGGCTCTTCT TCCAGGGGCG CACCAGCTTC
GGCGCATACC TCTGGAGTGA CTCCGGTCTA CAAACGAAGG CGCCGGCCAG CCGGGGCGAC
ATCGTCGTCA GCAACGGCGA CAGGGTGGCG ATTCTGAGTC AGAACAACGG CATTGCGCAG
GTGCGCATCA TCACCAATGC GCTTGATCCC GCCGATCCGA AAGTTATCGG CGCGACCGGC
TACCTGCCCG CGTGGCTCAT TACCGATCAG AATGTGCCGC CGCCGCCAAC TCCGGTTCCA
GATGCAGGGA AACTGTGGGT GCGCAAATTG AACGAGGATG ATGAACCAGG ATGTATCTCT
ATGCGCATCA CCGGGATCAA CACCCGGGGA TGGAGTTTCG GCGTCGATGG GATGAACCTG
GCCGGACGGT TTGACAATGC CGGTAATGCC CGACTGTGCG GGCTGGGTCC CGATCAGGAG
GTGACGATCA GCGTGCGCGA CCAGCGCGGC AGGGTGGTTC CCGGCGGCAG AGGCGTGCCT
GCTAAAGGAC GCGACATTAT GCTCGGAACC TGGCAACGGA ACTGA
|
|---|
| Protein sequence | MTLHQQTYRL YLGANQVTTV TLRTDEPLYR IVERLVIEHG LPVVDQYGQP ITYALYAGQI
RRLSNEMTLR QAGYDQGGDL YLANIYAPWW EGIPAVTRRF GDDPPAPNAR RIPYALVGIG
AAVALMVVIG GVLLFTIFSG RTGTAAQTSA LAQQPAQGAT QRSNPTATLA PAPTRQNTPQ
SAPPTATLAS TPQPMTGLPT ATLASIPQLT TALPTATLAS PGNTVAVLLP AGAEEASVAG
VKREYLNRDN RLFFQGRTSF GAYLWSDSGL QTKAPASRGD IVVSNGDRVA ILSQNNGIAQ
VRIITNALDP ADPKVIGATG YLPAWLITDQ NVPPPPTPVP DAGKLWVRKL NEDDEPGCIS
MRITGINTRG WSFGVDGMNL AGRFDNAGNA RLCGLGPDQE VTISVRDQRG RVVPGGRGVP
AKGRDIMLGT WQRN
|
|---|
| |