Gene RoseRS_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3492 
Symbol 
ID5210469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4379065 
End bp4379760 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content57% 
IMG OID640597087 
Producthypothetical protein 
Protein accessionYP_001277800 
Protein GI148657595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG AATTCGACGT ATCGTGGGCG CCTTCCGAGC ACAAGACGGT CTCTCGTGAA 
CCTGATAAGA CCATTCGTGA GGTCGTCCAG AGTCTGGTTG TGCAACTGAA CCTGCCGGAG
TACGATCCGC AGGGACGACG GATCGTCTAC GGGTTATACC GCGAGCACGA CGGTGAACGG
GAACTTCTCC AGGACGCACG CACGCTGAAA AGTGCGCGCA TCCAGGCGCA AACGGTCTAT
ATTGCGAATG TGGCTGCACC CTGGTGGCAG TCCAACGCTA CGCTGCCTGC TCCAAAACCA
GGTCCCCGCC CTCCGACAAA GCCACTGCCG CGACGACTCG CGTCGCCCTC TTCCTGCCGG
CTCAAACTGG CGCCCAGTTG CACTGTTGTG GTTCAGGGCG ATTATCTTGA ACTCGACCGC
GCCTACCTGT CGAGCACATT GCCCCAGACG ACCATCCTGG CGGAAAAAGC GCATATCTTC
AGCGGGTTTG ACTCGCGTCT CATGCACGTC AGTCGAAAGA ACCACTGCGC CATCATTCGC
CAGGGTGATC ACTGGCTGTT GCGCGCATAT AAACCCACCT ATGTCAACGG CAAATTACTC
AACAATGGTC AGACGGTGAC GATTCAGCCG CCAGGAGCGG AGGTTGTTCT TGGAAACGGC
GGATGGCCCA TCACCATTGA ACTGTTTGAG GCATAG
 
Protein sequence
MSIEFDVSWA PSEHKTVSRE PDKTIREVVQ SLVVQLNLPE YDPQGRRIVY GLYREHDGER 
ELLQDARTLK SARIQAQTVY IANVAAPWWQ SNATLPAPKP GPRPPTKPLP RRLASPSSCR
LKLAPSCTVV VQGDYLELDR AYLSSTLPQT TILAEKAHIF SGFDSRLMHV SRKNHCAIIR
QGDHWLLRAY KPTYVNGKLL NNGQTVTIQP PGAEVVLGNG GWPITIELFE A