Gene RoseRS_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3442 
Symbol 
ID5210419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4320505 
End bp4320864 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content55% 
IMG OID640597037 
Producthypothetical protein 
Protein accessionYP_001277750 
Protein GI148657545 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0862353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0858474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG TCCTTCGTCT CCTTGGCGTA GCGGCACTGA TCGCGTTGGG AGTGATTATC 
TACCGCGCCG TTCGCCAGTA TCGTGAAGAC AGCGTGTTCG ATCTGGGATC CAGTCCGCAA
TCACAGCCAT CGTCATCATC AAGCAGCGAG CCGCGCAGCA TCAGCCCGGA ATTGCTGGCG
ATTCTCGCCG ATCCGGGCGA TAAGGGACCG GTCGAGTTGA TGAAAGACAG TGAAGGAAAG
GAGTGGCTGG TCAATCGTCG CAACGGGTAT CGCTACCCGA TCGAGGATGG CATTCCGATC
ATGCTGCTCG AAGAGGGAGA AAAGAACCGC GACGAAAGCC TGATTATCAG GCAAGAGTAA
 
Protein sequence
MKLVLRLLGV AALIALGVII YRAVRQYRED SVFDLGSSPQ SQPSSSSSSE PRSISPELLA 
ILADPGDKGP VELMKDSEGK EWLVNRRNGY RYPIEDGIPI MLLEEGEKNR DESLIIRQE