| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3404 |
|---|
| Symbol | |
|---|
| ID | 5210381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4277390 |
|---|
| End bp | 4278028 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640596999 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_001277712 |
|---|
| Protein GI | 148657507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.843193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.543078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTCG GTGAACGTAT GTCTGCTCCG GTCATCACGG TGGAACCCAA AACCCCCATT
TCCGACGCGC TGATGCTCTT CCGGCAGAAG CGCATCCGAC GCGCGCCAGT CATTGCGCAT
CATCGACTGG TCGGCATTGT GTCGGAGCGC GATCTGCTGT ACGCCTCGCC TTCGCCGGTC
ACTTCATTGA GCGTGTGGGA AATGAACTAC CTGTTGAGTA AACTGACGGT CGATGAGGTG
ATGACACGCC AGGTGGTGAC CGTGACCGAA GACACGCCGA TCGAGGAAGC GGCGCGCATT
ATGGCGGATA AGCGCATTGG CGGTTTGCCG GTGATGCGTG GGCACGAGGT CGTCGGCATT
ATTACCGAAA CCGACCTCTT CAAAATCTTG CTGGAATTGA TGAGCGTGCG CGAGCATGGC
GTGCGGGTGA CGGCGTTGCT CGATGATCGC CCTGGTATGC TTGCACGATT GAGCACGGCG
ATCTTCGAAG CCAGCGGGAA CTTTATCTCG TTCGGTCAGT TCGACAAAGA AGACGGCGCG
CGGTTGATCA CCTTCAAGGT CAGCGGGTTG AGCCTCGACC GGGTGCGGGA AGTCATCGCG
CCGGTTGTCA AAAGCGTCTT TGACATTCGC GAGGTGTGA
|
|---|
| Protein sequence | MLVGERMSAP VITVEPKTPI SDALMLFRQK RIRRAPVIAH HRLVGIVSER DLLYASPSPV
TSLSVWEMNY LLSKLTVDEV MTRQVVTVTE DTPIEEAARI MADKRIGGLP VMRGHEVVGI
ITETDLFKIL LELMSVREHG VRVTALLDDR PGMLARLSTA IFEASGNFIS FGQFDKEDGA
RLITFKVSGL SLDRVREVIA PVVKSVFDIR EV
|
|---|
| |