Gene RoseRS_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3365 
Symbol 
ID5210342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4217063 
End bp4218922 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content63% 
IMG OID640596962 
Productpolysaccharide deacetylase 
Protein accessionYP_001277675 
Protein GI148657470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.249187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA CGTGGCATGC GGGCATTGTT GGAGCAGTCG CGCTTGGACT TATTCTGATG 
AGCACCGTAT TCGTCGCAGT GCAGGAGCGG ATGGGGCGGT GTGCAGCAGT GCCATTGATC
GCTGACGATC TGCTGGGCGC GCCTGATTTT TCCAACCTGG CGCCCGGTAC GCCGACCGGC
GTTCTGTTGC CGGTCGGCTG GAGCGCAGCC GCAAGCGGCG TACAGGTTGG CGACTTTACC
GTTTCCGGTT CAGGGCGCTC GTTCCAACTC CTCGGCATCG CCAACCACCT CCGCACCCCG
TCGGTCGCCG TGCGACCTGG CGTGTCGTAC TGCGCCACTG CGCAGGCGCT CGCCGACTCG
TCTTCGGCGA CTCGGGTGCG CCTCGGATTT CACTGGCTCG ACGCCAGCGG CGACATCCTG
CGCGTCGACT GGAGCGGGTG GCAGGAGGTG CGGCGCTGGA ACGGACCAAC TGACACTCAA
CCCTGGTCGC TGATCGGTGG AGGGTTCACC GCCCCGCCTG AAGCCACCCA TCTTGCGGTG
ACGTTCCATC CTGCATCTGA TGATCGGGTC TACCTCGACC TGATCCGCAT CCGACACGGG
CGCTTCCCAC ACACCGGCGA GATGCCGCCA GCATCACCTG AGCAGACTGC CGGGGTTGAG
GCGCTTCCCT GGCCCAACGG CGCGCGCGCA GCGCTCTCAT TTTCGTTCGA TTGGGAAACG
ACGATGGGCG GGTTGATCCA TTCGCGTTCG GTCGATGACC CAAACGTCGA TCAGGACCCG
CTTATGCGAG GAATGCGGAT GCGCGAAGGA ATCACGACAA CGCTGGACAT CTTCCGACCA
TACGGCATCC GCGCCACCTA CTACGCAACC GGGTACAATT TCCTGACCGG CAACCGCGAG
CAGCGGCGCT TCATGGGAGA CCCGACGTTC ACGTGGGCGA ACCGTGCTAA CCGCTGGCAA
ACCGACGCCT GGCAGCAGCA ACCCTGGTTC TCACCCGATC CGTATGGCAC GGTAGCGACT
GACCCTGCCT GGTATTTTGG CGACCTGATC CCGCTGGTGC AGCGCGAGGG ACATGATATT
CAGAGCCATA CGTTCAGCCA CCTGTACGGC GGGCTTGCGA GCGCTGAGGA GTGGCGCAGC
GATCTCTCCG AATGGCGGAG AGTCGCTGCA GAGCACAATG TCCCGCCAGC GCGGTCGCTG
GCGTTTCCGT GGAGCAGCAG CGCCGGCATG AGTTACGCGA ACTGGCAGGC GCTGGCAGAA
GCCGGCATCA CGTCGGTGAC GCGCACGAAC TGGAATCCGC GCCAACCGCA GTACCATCTG
GTGAGCAGGG ATGAACCGCA CTGCCGACCG GTTCCGGGCC ACGAAGCGAT CCTCGCCTGC
CCGGATTTCT ACCTGACAGA GCAGAGCGCT GCGGAAGCGC CAGGCGTGAT CGAGCGCGCC
ATCAACACCG GCGGCATGAT CGACCTGTGG GCGCACACCG AAGAAGTCGT CACTCCGGCG
CAGATCGCCG TGTGGCGCAA CGTTGTGCGC TATGCCGTCG GGCGCCGCGA TGCGGGCGAT
CTGTGGATTG CGCCGCTGGC GGAGATTGCC GACCGGCAAC AGGCGGTGGC GCTGGTGCGC
ATCGAGCGAC ACGAATCAGA ACCGGTTCAC GACATGTCCT CAAACGCACC GTTGCATTTC
CTGGTTACGA ACCATAGCGT ACACGACCTG CAAGGATTGA CGCTCAACCT GCCGTCTGTC
ATCCAACAGG TAACGTTGGA CGGCGAACAG AGCAACGCAA CGCCTGTTGT TCGCGGTACG
CTGCTGATCT TCGATCTGGC AGCCGGTGAG ACCATCGAGG TGACGGCATG GTTGGGGTAA
 
Protein sequence
MKRTWHAGIV GAVALGLILM STVFVAVQER MGRCAAVPLI ADDLLGAPDF SNLAPGTPTG 
VLLPVGWSAA ASGVQVGDFT VSGSGRSFQL LGIANHLRTP SVAVRPGVSY CATAQALADS
SSATRVRLGF HWLDASGDIL RVDWSGWQEV RRWNGPTDTQ PWSLIGGGFT APPEATHLAV
TFHPASDDRV YLDLIRIRHG RFPHTGEMPP ASPEQTAGVE ALPWPNGARA ALSFSFDWET
TMGGLIHSRS VDDPNVDQDP LMRGMRMREG ITTTLDIFRP YGIRATYYAT GYNFLTGNRE
QRRFMGDPTF TWANRANRWQ TDAWQQQPWF SPDPYGTVAT DPAWYFGDLI PLVQREGHDI
QSHTFSHLYG GLASAEEWRS DLSEWRRVAA EHNVPPARSL AFPWSSSAGM SYANWQALAE
AGITSVTRTN WNPRQPQYHL VSRDEPHCRP VPGHEAILAC PDFYLTEQSA AEAPGVIERA
INTGGMIDLW AHTEEVVTPA QIAVWRNVVR YAVGRRDAGD LWIAPLAEIA DRQQAVALVR
IERHESEPVH DMSSNAPLHF LVTNHSVHDL QGLTLNLPSV IQQVTLDGEQ SNATPVVRGT
LLIFDLAAGE TIEVTAWLG