| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3348 |
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| Symbol | |
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| ID | 5210325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4198061 |
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| End bp | 4199770 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596946 |
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| Product | TadE family protein |
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| Protein accession | YP_001277659 |
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| Protein GI | 148657454 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGGC GGACGCCCGT TCTATGCCCG GCGTCCGTGC GTAACCGCTC AAACGGGGGC
GCGGTATCCC GACGAACGAA GATAAGACTT TGTAATGAGG ACATCATGCC ACTTCGAGGG
ACAACCGGAC GACGACAGGC GCAGAGCGTG GTGGAGTTTT CGATCATTCT GCCGCTGCTC
CTGCTCCTCA TTCTGGGCGT GATCGAACTT GGCTACATGC TGTTCGTCTA CGTTCAGTTG
CACAACGCAG CCAGCGAAGG CGCCCGGAGC GCCGCTGTGC GTCCCTGCCC GAACCAGAAC
GACATTGATC GCATCATTGC CGATACGCGC GGGCGCATTG TGGCATTTGT CGATACCAGC
GTCATCACCC CCAGCATCAG CTGGAGCGCC GATGCGAACG GAAATCTCCG CTGGCGCTAC
ACCGATCCGG TCACCGTTTC CCTGAAGTAC GCGCTGGAAC CGCTCGACCC GATCGTTGGC
GCATTCATTC CACAGATTGA GATCGATGCT GTTGCCTCAC GGTCGATCAC CACCGACTGC
GATATCGCAT CGATCGTGCG GGCAACACCG ACACCTACGC CCACACCAAC CGATACGCCA
ACGCCCTCGA ACACGCCGAC CCCAACGGAT ACCGCAACAC CGACAAATAC GTCCACACCG
ACGAACACGC CGACGCGGAC AAATACGCCA ACGCCGACGA ACACACCGAC GCGCACAAAT
ACGCCAACGA TGACGAGCAC CCCCACGAAT ACGCCGACGC CGTCGAGCAC ACCGACACGC
ACAAATACGC CGACGCCGTC GAGCACGCCC ACGCCCTCGA ATACGCCGAC ATCGACAAAT
ACGCCGACGC CGTCGAACAC ACCGACAAAC ACGCCGACAC GCACGAATAC ACCGACGCCG
TCGAACACCC CGACGCGCAC GAACACGCCG ACGCGCACGA ATACGCCGAC ACGCACGAAC
ACGCCGACGA ATACCCTGAC GCCGTCGAAC ACGCCGACGC CCTCGAATAC CCTGACGCCG
TCGAACACGC CGACGCCGTC CAATACGCGG ACACCCAGCC CAACACGCAC GCCCACGCCG
ACGCGCACGA ATACGCCGAC GCGCACGAAT ACGCCGACGC GCACGAATAC GCCGACGCGC
ACAAACACAC CAACGCCGTC GAACACGCCG ACGCGCACGA ATACGCCGAC GCGCACAAAC
ACACCAACGC CGTCGAATAC GCCGACGCGC ACGAATACGC CGACGCGCAC AAACACACCA
ACGCCGTCGA ACACGCCGAC ACGCACGAAT ACGCCAACGC ACACGAATAC GCCGACGAAC
ACACCGACGC CGTCGAACAC GCCGTCGCCG TCGGTGACCC CGACGCCACA GCCGATTACC
TACTCGGTCG TTGGTTCCAA ACGAATCGAT CCTGATGCTC CGCCTGGTGA ACTGGCAGAC
CTGCGCATTC GTATCATTGT GCGCAACAGT CAGGGGCAAC CTGTTCCGGG GGTAAGTTTC
AACATCACGG TGTCTGGCGC ATCACCGGTT ACCTCATGGA CCGGTGTCAG TGACAGCAAT
GGCGTGATTG TCATTTGTAT CGCCAATACC TATCGAGCGC GCGACAACCT TGATGTCACA
ACGGATGTCA CCAGTCCTGA ATATCCTGAC CCGGGGCTGG ATGGTCGCCG AGTCACGGTT
CAGAACGGTG CGGTGACGTG TGGTTCGTGA
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| Protein sequence | MKRRTPVLCP ASVRNRSNGG AVSRRTKIRL CNEDIMPLRG TTGRRQAQSV VEFSIILPLL
LLLILGVIEL GYMLFVYVQL HNAASEGARS AAVRPCPNQN DIDRIIADTR GRIVAFVDTS
VITPSISWSA DANGNLRWRY TDPVTVSLKY ALEPLDPIVG AFIPQIEIDA VASRSITTDC
DIASIVRATP TPTPTPTDTP TPSNTPTPTD TATPTNTSTP TNTPTRTNTP TPTNTPTRTN
TPTMTSTPTN TPTPSSTPTR TNTPTPSSTP TPSNTPTSTN TPTPSNTPTN TPTRTNTPTP
SNTPTRTNTP TRTNTPTRTN TPTNTLTPSN TPTPSNTLTP SNTPTPSNTR TPSPTRTPTP
TRTNTPTRTN TPTRTNTPTR TNTPTPSNTP TRTNTPTRTN TPTPSNTPTR TNTPTRTNTP
TPSNTPTRTN TPTHTNTPTN TPTPSNTPSP SVTPTPQPIT YSVVGSKRID PDAPPGELAD
LRIRIIVRNS QGQPVPGVSF NITVSGASPV TSWTGVSDSN GVIVICIANT YRARDNLDVT
TDVTSPEYPD PGLDGRRVTV QNGAVTCGS
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