Gene RoseRS_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3346 
Symbol 
ID5210323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4196184 
End bp4197362 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content61% 
IMG OID640596944 
Producthypothetical protein 
Protein accessionYP_001277657 
Protein GI148657452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGAT TGCGAAGGAC GGAGTTCCAG CCAGGGCAGG CGATCCCGGT TCTGGCGCTG 
ACGCTCCTCT TGCTGATCGC ATTTGCGGGG CTGGCGATCG ATGGCGCGCT GGCGTTCGCC
TGGCGGCGCA ATGTGATGAA CAGCGCCGAT GGCGCTGCGC TGATCGCCAC CCGCGCCCTG
ATCGTTGATC GCGGGAGCGT CAATGGCATT GCCATCACCA ATGCGGTGCG CACCTATCTG
CAAGCCGAAT TGGGCGTCGA TAATCCCGAC TTTGAACTGA CCTACGTCAA CGGCGCCGGT
CAGTCTATGG GAACGGTCGA CAGCAGTCCG GCGCCAGTCA ACGCACGCGG CATCGGCATT
GTCGTGCGAC ACACATTCGA CACCTATCTG ATGGGCATTC TGGGGCAACC AACGTTGACT
GTGCGTGGCG TCTCAGCGGC GCGCTTCGGC AATGGCGGCA TGCTGATCGG CGACTTGATT
GCGCCGATGG GGTTGCTGCC GGAAGCGGCG GAGTTCTTTC GCAGCAACCC GACCAGCGCG
CTGGTCGATC TGAGCGGTTT TCTCGAAGAA CGGAACGATC AGATCCGGAC CGATTTCTTG
AACGGCATGT ATCCGTATCT GGAACGGCCT GAAGACCATC CCGACTGGGT CGATCCAGAT
ACCTTTGTGA AACGATGGCA GGTGCGCGCT GTTGCGCTGC GCATGGGTTC AGCAACGCCA
CCGTCATTGG GTCCAGGGGC GAGTTGCCCT GCAACGCCAG CCGATACACT GAAATCGTGG
TGGTGTTTTG GCGCGCACCG GCAGGTGAAC ACCCGTATCG CCGGCGATGG CGATCAGGTG
GCGCTGGCGA TGGATCTGAT CGGCGTCGAG CCATACGCCA GTTCGCTGAA CGCGACGCTG
CTGAGCGGCG GTTTTCTCGA TGCACGCCTC AATCAAGTGA TCATTGTGCC GGTGCTGGCG
GAAGCGTCCG ACTCGGATCA GTGGTCAGGA GCGAGCCCGG TTTACGTGAT CGAATATTTT
ATGGCGCTCC GCCTGACCGA CATCGACTAT GCCAGTGGCA CGATCACCGT TGATTATCTC
CCGCGCTACC TGACGAACGG CGGGTTGATG GGGAGCAACA ACAACGTCGA ACGCGGCGCT
CCCTGCGAGG TGTGCGTCGT CAACCTGGTG CGCGAGTAG
 
Protein sequence
MRRLRRTEFQ PGQAIPVLAL TLLLLIAFAG LAIDGALAFA WRRNVMNSAD GAALIATRAL 
IVDRGSVNGI AITNAVRTYL QAELGVDNPD FELTYVNGAG QSMGTVDSSP APVNARGIGI
VVRHTFDTYL MGILGQPTLT VRGVSAARFG NGGMLIGDLI APMGLLPEAA EFFRSNPTSA
LVDLSGFLEE RNDQIRTDFL NGMYPYLERP EDHPDWVDPD TFVKRWQVRA VALRMGSATP
PSLGPGASCP ATPADTLKSW WCFGAHRQVN TRIAGDGDQV ALAMDLIGVE PYASSLNATL
LSGGFLDARL NQVIIVPVLA EASDSDQWSG ASPVYVIEYF MALRLTDIDY ASGTITVDYL
PRYLTNGGLM GSNNNVERGA PCEVCVVNLV RE