Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3275 |
Symbol | |
ID | 5210250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4126413 |
End bp | 4127387 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640596871 |
Product | hypothetical protein |
Protein accession | YP_001277586 |
Protein GI | 148657381 |
COG category | [S] Function unknown |
COG ID | [COG2307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000743183 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.197732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAA CGCCAATGCT CAGCCGGGTC GCCGACAGTC TCTTCTGGAT GGCGCGCTAT CTGGAGCGTG CCGAACACAC GGCGCGCCTG CTTGATGTGC ATTTGCATAG CGCGCTCGAT CTGACGCCAA CCGCCGCCGA GCGGCGCTGG CGTCGCCTGC TGCTGGCGTT GCACAGCCAG CCGCCCGCTG CTGGCGTCAC TCCCTATGCG ATCACCCAGG CATTGACCTT CGATATGTCC AACAGCGACT CGATCGCGGC ATGTATTACG ACGGCGCGCG ACAATGCCCG TCAGGTGCGT GAGCGCATCA GTTCCGAAAT GTGGGAGCAG GTCAACCGCC TCTATCTCCA GATTCGTCAT ACCTCAATGG AAGAGATGTG GTCGGGTGAA CCGCACCTCT TTTTTCGATC GGTCAAAGAA GGCGTTCACC TGTTTCAGGG CATCACCGAT GCAACCCTGA GCCATGATGA GGGATGGTGG TTCATTCAGA TCGGGCGGTA TCTTGAGCGC GCCATGGCGA CCGCAGCGTT GCTCGATGTT CATTTCTGTT CGCTCGAAGG ATCGGACGCT GAGATGCTCG ATTACTTCGA GTGGGTCGCT CTGTTGAAGA GTTGCACGGC GTTCGAGGCG TACTGTAAAG TGTACACTGC CAGCATTCGT CCTGAGGATG TTGCCGAGTT CCTGTTGCTG AATGCCGAGT TCCCGCGTTC GATCCGCTTT GCCGCCGATA TGATCCAGGA AGCGGCGCAG TCCATCGGTC GCTCCAGCGC CCACCGCGCT ACTGCACGCG TCGAACGCCT TGCCGGTCGT CTGCGCGCAG TACTTGATTA TGGTCAGGTG GATGAGATTA TGACCGATAT GCACACATTT CTGATGTCCA TTCGTCGTAT GTGCGTCCAG GTGCACGATG AGATCTATCG GGCGTGCATC AGTTATCCGG CGGATGAAGC GTTGAAGGGC GAAGGCGTTC CCTGA
|
Protein sequence | MTKTPMLSRV ADSLFWMARY LERAEHTARL LDVHLHSALD LTPTAAERRW RRLLLALHSQ PPAAGVTPYA ITQALTFDMS NSDSIAACIT TARDNARQVR ERISSEMWEQ VNRLYLQIRH TSMEEMWSGE PHLFFRSVKE GVHLFQGITD ATLSHDEGWW FIQIGRYLER AMATAALLDV HFCSLEGSDA EMLDYFEWVA LLKSCTAFEA YCKVYTASIR PEDVAEFLLL NAEFPRSIRF AADMIQEAAQ SIGRSSAHRA TARVERLAGR LRAVLDYGQV DEIMTDMHTF LMSIRRMCVQ VHDEIYRACI SYPADEALKG EGVP
|
| |