Gene RoseRS_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3275 
Symbol 
ID5210250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4126413 
End bp4127387 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content58% 
IMG OID640596871 
Producthypothetical protein 
Protein accessionYP_001277586 
Protein GI148657381 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000743183 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA CGCCAATGCT CAGCCGGGTC GCCGACAGTC TCTTCTGGAT GGCGCGCTAT 
CTGGAGCGTG CCGAACACAC GGCGCGCCTG CTTGATGTGC ATTTGCATAG CGCGCTCGAT
CTGACGCCAA CCGCCGCCGA GCGGCGCTGG CGTCGCCTGC TGCTGGCGTT GCACAGCCAG
CCGCCCGCTG CTGGCGTCAC TCCCTATGCG ATCACCCAGG CATTGACCTT CGATATGTCC
AACAGCGACT CGATCGCGGC ATGTATTACG ACGGCGCGCG ACAATGCCCG TCAGGTGCGT
GAGCGCATCA GTTCCGAAAT GTGGGAGCAG GTCAACCGCC TCTATCTCCA GATTCGTCAT
ACCTCAATGG AAGAGATGTG GTCGGGTGAA CCGCACCTCT TTTTTCGATC GGTCAAAGAA
GGCGTTCACC TGTTTCAGGG CATCACCGAT GCAACCCTGA GCCATGATGA GGGATGGTGG
TTCATTCAGA TCGGGCGGTA TCTTGAGCGC GCCATGGCGA CCGCAGCGTT GCTCGATGTT
CATTTCTGTT CGCTCGAAGG ATCGGACGCT GAGATGCTCG ATTACTTCGA GTGGGTCGCT
CTGTTGAAGA GTTGCACGGC GTTCGAGGCG TACTGTAAAG TGTACACTGC CAGCATTCGT
CCTGAGGATG TTGCCGAGTT CCTGTTGCTG AATGCCGAGT TCCCGCGTTC GATCCGCTTT
GCCGCCGATA TGATCCAGGA AGCGGCGCAG TCCATCGGTC GCTCCAGCGC CCACCGCGCT
ACTGCACGCG TCGAACGCCT TGCCGGTCGT CTGCGCGCAG TACTTGATTA TGGTCAGGTG
GATGAGATTA TGACCGATAT GCACACATTT CTGATGTCCA TTCGTCGTAT GTGCGTCCAG
GTGCACGATG AGATCTATCG GGCGTGCATC AGTTATCCGG CGGATGAAGC GTTGAAGGGC
GAAGGCGTTC CCTGA
 
Protein sequence
MTKTPMLSRV ADSLFWMARY LERAEHTARL LDVHLHSALD LTPTAAERRW RRLLLALHSQ 
PPAAGVTPYA ITQALTFDMS NSDSIAACIT TARDNARQVR ERISSEMWEQ VNRLYLQIRH
TSMEEMWSGE PHLFFRSVKE GVHLFQGITD ATLSHDEGWW FIQIGRYLER AMATAALLDV
HFCSLEGSDA EMLDYFEWVA LLKSCTAFEA YCKVYTASIR PEDVAEFLLL NAEFPRSIRF
AADMIQEAAQ SIGRSSAHRA TARVERLAGR LRAVLDYGQV DEIMTDMHTF LMSIRRMCVQ
VHDEIYRACI SYPADEALKG EGVP