Gene RoseRS_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3221 
Symbol 
ID5210196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4058250 
End bp4059059 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID640596817 
Producthypothetical protein 
Protein accessionYP_001277532 
Protein GI148657327 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.71448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGC GGTTGGACCT GCCTGACCCG ACGGTGACCG CGCGTGGGCG TGGTGTGACC 
GGGATGGAAT ATCAGATTGT TGGGACGACC TTGCAGGCGG TCATTCTTGA ACTTGACCCT
GGCGAGACGG TCTACTCCGA GTCGGGCGCG ATGTCCTGGA TGTCGGGCAA CATCCAGATG
GCGACCAACA CCCGCGGCGG CGGGCTTGGC GGGATGTTCA AGCGCGCCAT CTCCGGCGAG
AGCCTGTTCC TCAACGAGTT CACCTCGGCT GGCGGCAAGG GCATCGTCGC CTTCGCATCC
GATTTCCCCG GCAAGATCGT GCCGGTTCCG CTTCTCGAAG GGCAGAGTAT GATCGTCCAG
AAGCAGGCGT TCCTCTGCGC CGAGAAAACG GTCGGGCTTG ATATCCACTT CCGCAAGCGC
CTGGGCGCGG GGTTCTTCGG CGGCGAGGGG TTCATCATGC AGAAGTTAAC CGGTCCGGGG
GTGGCGTTCG TCTGTCTGGA CGGCGAGATC GTCGAGTATA CGCTGGATGC GGGGCAGGTG
CTGAAGGTGG ACACCGGGCA CGTGGCGATG TATGAGCCGA CGGTGGAGTT CGACATCGAG
ATGGTGAAGG GGTTCAAGAA CATTCTGCTG GGCGGCGAAG GGTTGTTCCT GACGACGCTG
CGCGGACCGG GGCGCGTCTG GTTGCAGACG ATGCCGACCG CCAATCTCGC CAAAGCTGTT
GCCGGATATA TATCGTTTGG CGGGAGTAGT CGAAGTGGGA GCAGCGGCGA TGTGATTGGT
GATGTGATCG GCGGTCTGCT CGACCGGTAG
 
Protein sequence
MGQRLDLPDP TVTARGRGVT GMEYQIVGTT LQAVILELDP GETVYSESGA MSWMSGNIQM 
ATNTRGGGLG GMFKRAISGE SLFLNEFTSA GGKGIVAFAS DFPGKIVPVP LLEGQSMIVQ
KQAFLCAEKT VGLDIHFRKR LGAGFFGGEG FIMQKLTGPG VAFVCLDGEI VEYTLDAGQV
LKVDTGHVAM YEPTVEFDIE MVKGFKNILL GGEGLFLTTL RGPGRVWLQT MPTANLAKAV
AGYISFGGSS RSGSSGDVIG DVIGGLLDR