Gene RoseRS_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3143 
Symbol 
ID5210113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3953466 
End bp3954083 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content60% 
IMG OID640596734 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001277454 
Protein GI148657249 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.491163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA AAACGCTGCG CGAGTCGAAA GATGCGCTGT TCACCTGGCT GGTACGCGGT 
CCTGTTCGCC AGATCCATCC CGCGGTCGTT ACTGTTCTGG CGGCTGTCGT CGGTGTTGCG
GCTGCCGTCG CCGCCTGGCA GAGCGCGTAT GTGGCGGCGG TGTGTCTCTG GTTGATGAAC
CGCGCGCTCG ATGGACTCGA TGGCGCCATT GCGCGGGTTA CAGGCACGCA GAGCGATCTG
GGAGCATACC TTGACATCAT GCTCGATTAT GTCGTCTATG CGGCCATACC GCTGGGATTG
GCGCTCGCAA GCGGAGAATC CGCCGTTCTG CTGGCGCTGG CAGTGCTGCT GGGAAGTTTC
TATCTCAACA GCGCAAGCTG GATGTATCTG GCGGCTATGT TGGAGAAGCG CAACGCTGGC
GCTGCGTCGC GGGGCGAAAC CACGTCGGTG ACGATGCCAG CGGGGTTGAT CGAAGGCGCC
GAGACGATAG TGTTCTATAC GCTCTTCCTG CTGTTTCCCA ACGCTCTGGT TCTCTTGTTT
TCGTTGATGG CGACGCTGGT GCTGGTCACC GCCAGTCAAC GGGTAGGCTG GGCGCTGTGG
CATATGAAAG ATGGGTGA
 
Protein sequence
MIDKTLRESK DALFTWLVRG PVRQIHPAVV TVLAAVVGVA AAVAAWQSAY VAAVCLWLMN 
RALDGLDGAI ARVTGTQSDL GAYLDIMLDY VVYAAIPLGL ALASGESAVL LALAVLLGSF
YLNSASWMYL AAMLEKRNAG AASRGETTSV TMPAGLIEGA ETIVFYTLFL LFPNALVLLF
SLMATLVLVT ASQRVGWALW HMKDG