| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3090 |
|---|
| Symbol | |
|---|
| ID | 5210058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3883181 |
|---|
| End bp | 3883756 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640596681 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277403 |
|---|
| Protein GI | 148657198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.259249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTG CGCTTGAGCC GCGGATCGTC GAAGAGCCTG GCAACGGAAC ACTCGAAATC
TTTCCGCTGG AACCGAAAGA AGAGACCCTG GTCGCGCTGA TGACCGAATT CTTCCGCGAT
CACTGGGACA AGATCCACTT CGGTCCGCTC ATCCAGGGAT CGGTGTTCGA GATCAAAGCC
ACAGCGCCGC CGACAAAGAT CGGCATGCTC GATGGCTACC TGACCGTCGA CTTTGGCGCG
TGGCACTTCC ACATCTGCAT CGGCGAGCAC AAAGGCAGCA AAAACAAGCC GGTCGATCCG
GAACTCGCGC GCCACCGTCG CACCGCGCGC GCTGAGTTCT ACCGTCGGCT CAACCCCGAT
GGCACAGTAG GGAGCTGGGG ATTCCGCCTC TTCAATGGCA AAGACGAAAA CCAGATCTAC
ATCTTCCTGC CCAATCCATT TCTGTCAGAC GATATGCGCT TCCTCAAGCA ACCCGATTGG
TCACGCCTGG CGCTGTGGGA TGATCTGCGG CAGCGTTATC TGGGGTTGCC GCCCGATCCC
AGAGACCGGA GCGGCAAGAC GATGTTCCAC GGTTGA
|
|---|
| Protein sequence | MTAALEPRIV EEPGNGTLEI FPLEPKEETL VALMTEFFRD HWDKIHFGPL IQGSVFEIKA
TAPPTKIGML DGYLTVDFGA WHFHICIGEH KGSKNKPVDP ELARHRRTAR AEFYRRLNPD
GTVGSWGFRL FNGKDENQIY IFLPNPFLSD DMRFLKQPDW SRLALWDDLR QRYLGLPPDP
RDRSGKTMFH G
|
|---|
| |