Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2972 |
Symbol | |
ID | 5209940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3722921 |
End bp | 3724015 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596564 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001277286 |
Protein GI | 148657081 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCGT TTACTCCGTC GGAAGAGCAG CAGTTGATCA TCGACACCGT GCGCCGCTAT GCGGTTGATC GGATGCGCCC CGCCGCCTAC GAGGCGGACG AGAAGCGCGC AATTCCATCG GACATTATTG CGCGGGGGTG GGATCTGGGC TTGTTGCCGA GCGCCATCCC GGAGCAGTAC GGCGGCTTTG GCGAGACGCA TCAGGCGCTG ACCGGCGTTC TGGCGGCAGA AGAGTTGGGG TATGGCGATC TGTCCATGGC GCTGTACCTG ATGACCCCCA ATCTGTTTGC GATCCCGATC CTGCACTTCG GCACTGAAGA GCAGAAGGAA CGCTGGTTGC CACGCACGGT GGAAGGCGGG TTTGCGCCGT ATACGGCGGC GTTGATCGAG CCGCGCTGGA GTTTCGACCC GCATGCGCTG CATACGGTTG CCGAGCGTGA GGGTAATGTC TACGAGATTA CGGGGCATAA GGCGCTCGTG CCGCTCGCTG CCGATGCACA GGCGTTCCTG GTTTATGCCC GTGAAAATGA TACGACCCAG GCGTTTATCA TCGAACGCGG CACGGAAGGA CTGGCGGTAC TGGAACGCGA GAGTTTCATG GGCATTCGCG CGTTGCCAAC CTACGAATTG CGCCTGGACG ACGTGCATGT GCCGGCATCG TGTCGACTGG GGGGCGAGCA GGGCATCGAT ATCGAAGCGT TGATGAATTA TTCGCGGGTT GCGCTGGCGG CGCTGGCGGT CGGTGTGGCG CGCGGCGCTT TCGAGTATGC GCGCGATTAT GCGAAGCAGC GCGAAGCATT TGGGAAACCG ATTGCGCAGA ACCAGGCAAT TGCGTTCATG CTGGCTGAGA TGGCGATTGA AATCGAGGCG GCGCGCCTGA TGACCTATGA AGCGGCATGG CATCTCGACA AAGGACACAA TGCCACGCAG TCGGCGTCGC TCGCCAAGGC GTATGCTGAT GAAATGGCGT TGATGGTGAC CGACCGCGCC GTGCAGATCC TTGGCGGTCA TGGCTATATT CGCGAGCATC CAGTCGAGCG CTGGCTGCGG AACGGGCGTG GGTTCAGCAC GTTCCTCGGT CTGGCGATGG TGTGA
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Protein sequence | MISFTPSEEQ QLIIDTVRRY AVDRMRPAAY EADEKRAIPS DIIARGWDLG LLPSAIPEQY GGFGETHQAL TGVLAAEELG YGDLSMALYL MTPNLFAIPI LHFGTEEQKE RWLPRTVEGG FAPYTAALIE PRWSFDPHAL HTVAEREGNV YEITGHKALV PLAADAQAFL VYARENDTTQ AFIIERGTEG LAVLERESFM GIRALPTYEL RLDDVHVPAS CRLGGEQGID IEALMNYSRV ALAALAVGVA RGAFEYARDY AKQREAFGKP IAQNQAIAFM LAEMAIEIEA ARLMTYEAAW HLDKGHNATQ SASLAKAYAD EMALMVTDRA VQILGGHGYI REHPVERWLR NGRGFSTFLG LAMV
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