Gene RoseRS_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2972 
Symbol 
ID5209940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3722921 
End bp3724015 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content61% 
IMG OID640596564 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001277286 
Protein GI148657081 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCGT TTACTCCGTC GGAAGAGCAG CAGTTGATCA TCGACACCGT GCGCCGCTAT 
GCGGTTGATC GGATGCGCCC CGCCGCCTAC GAGGCGGACG AGAAGCGCGC AATTCCATCG
GACATTATTG CGCGGGGGTG GGATCTGGGC TTGTTGCCGA GCGCCATCCC GGAGCAGTAC
GGCGGCTTTG GCGAGACGCA TCAGGCGCTG ACCGGCGTTC TGGCGGCAGA AGAGTTGGGG
TATGGCGATC TGTCCATGGC GCTGTACCTG ATGACCCCCA ATCTGTTTGC GATCCCGATC
CTGCACTTCG GCACTGAAGA GCAGAAGGAA CGCTGGTTGC CACGCACGGT GGAAGGCGGG
TTTGCGCCGT ATACGGCGGC GTTGATCGAG CCGCGCTGGA GTTTCGACCC GCATGCGCTG
CATACGGTTG CCGAGCGTGA GGGTAATGTC TACGAGATTA CGGGGCATAA GGCGCTCGTG
CCGCTCGCTG CCGATGCACA GGCGTTCCTG GTTTATGCCC GTGAAAATGA TACGACCCAG
GCGTTTATCA TCGAACGCGG CACGGAAGGA CTGGCGGTAC TGGAACGCGA GAGTTTCATG
GGCATTCGCG CGTTGCCAAC CTACGAATTG CGCCTGGACG ACGTGCATGT GCCGGCATCG
TGTCGACTGG GGGGCGAGCA GGGCATCGAT ATCGAAGCGT TGATGAATTA TTCGCGGGTT
GCGCTGGCGG CGCTGGCGGT CGGTGTGGCG CGCGGCGCTT TCGAGTATGC GCGCGATTAT
GCGAAGCAGC GCGAAGCATT TGGGAAACCG ATTGCGCAGA ACCAGGCAAT TGCGTTCATG
CTGGCTGAGA TGGCGATTGA AATCGAGGCG GCGCGCCTGA TGACCTATGA AGCGGCATGG
CATCTCGACA AAGGACACAA TGCCACGCAG TCGGCGTCGC TCGCCAAGGC GTATGCTGAT
GAAATGGCGT TGATGGTGAC CGACCGCGCC GTGCAGATCC TTGGCGGTCA TGGCTATATT
CGCGAGCATC CAGTCGAGCG CTGGCTGCGG AACGGGCGTG GGTTCAGCAC GTTCCTCGGT
CTGGCGATGG TGTGA
 
Protein sequence
MISFTPSEEQ QLIIDTVRRY AVDRMRPAAY EADEKRAIPS DIIARGWDLG LLPSAIPEQY 
GGFGETHQAL TGVLAAEELG YGDLSMALYL MTPNLFAIPI LHFGTEEQKE RWLPRTVEGG
FAPYTAALIE PRWSFDPHAL HTVAEREGNV YEITGHKALV PLAADAQAFL VYARENDTTQ
AFIIERGTEG LAVLERESFM GIRALPTYEL RLDDVHVPAS CRLGGEQGID IEALMNYSRV
ALAALAVGVA RGAFEYARDY AKQREAFGKP IAQNQAIAFM LAEMAIEIEA ARLMTYEAAW
HLDKGHNATQ SASLAKAYAD EMALMVTDRA VQILGGHGYI REHPVERWLR NGRGFSTFLG
LAMV