Gene RoseRS_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2650 
Symbol 
ID5209619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3286689 
End bp3287876 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content58% 
IMG OID640596252 
Producthypothetical protein 
Protein accessionYP_001276974 
Protein GI148656769 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTG TTGTGCAGCG TCTGAGTTCG TTGCGTCGAT TGCTCCGTCC GCTGGCGTTG 
ACATTTGTGG GCATTGTCCT GCTGTCACTC GGTGTGGCAT ATTTCTTCAT CTTCATCTAC
CGCACGGCGA CGTTGCCGCC GATGTTCTCG TTCATCACGC TGCAATTTCT GCCCTTATGG
GCGCGCGGGC TGGTATTCGC GGCGTTGGGG CTGATCGTGC TCGCTGTCGG CATCTGGCAA
CTCAGCGGCG TCGCAGTTAT CTCACTCGAT GCCCGCGACA CGAGCGGCGA AGTCGTGCTC
GCCTATCAGC GCGATCAGAT GCATCCGCGG ATGACGGTCA TTTCCGGCGG CGCAGGGTTG
TTGATCACTG CCAGTCTCGG TCGAATGGCT CAGTTGTTGA CCTGTATCAC GCCGGTTCAG
GATCCGGTCG AGTACTACTA CCGCGCGTCC AGTCTGTTCA ACTTCGAAAA TGTGGTCTTT
GTGGTGCCGA CGCTTGAACC GCATGAGGTG TTCGTCGAGC TCGACGATGG TCAACGCTTC
AATATCAAGC ACAATATCGC CCACGATGAA CGCCTGGCGC AGCGTCATGT CGTCAATATC
TACATCGGCG ACGAACACGG ACCCGTCACC ACGCCGTTGC AGGTCACCCA GGTTGCGCTT
GATGCGATCG CCTCCGCCGA TGTCATTGTG TTCGGTCCCG GCAGTCTGTA TGAAAGCATC
CTGCCCAACC TGCTCATTCC CGACCTGCGC GACGCCATCC GTCGCAGTAA GGCGTGCAAA
ATCTACATAT GCAGTCTGAT GACCGAACCT GGCATGACCA CCGGCTACAG TGTTGGTGAT
CATGTGCGCC AGATCGTGCG CTTCGGCGGC TTCACTCCCG ATTATGTCCT GGTCAATGCA
CCGCGTATCG ATGCAGAAGT ACGCCGGATT TACGCAGCCG CCGGGCAGAT GCCGGTCTTT
CTCACACCCG AGGAATACGA AGAAACCGCA GTCAGCACGA CCGACCGGCT GACCACGCGG
GATATTCTCA TCGAGGGCGC AAAAGTTATC GAAGCCGATC TTGCGACTGC GGTGGTCCAG
TTGACGGCGT CGCTCGATCA TCCCGGCGAG GGGCGCACGG TACGCGTGTT GCGTCATGAT
CCTGAAAAAC TGGCGACCGC GATTATGGAA GTGTGGAAGC GGCAGTAA
 
Protein sequence
MQPVVQRLSS LRRLLRPLAL TFVGIVLLSL GVAYFFIFIY RTATLPPMFS FITLQFLPLW 
ARGLVFAALG LIVLAVGIWQ LSGVAVISLD ARDTSGEVVL AYQRDQMHPR MTVISGGAGL
LITASLGRMA QLLTCITPVQ DPVEYYYRAS SLFNFENVVF VVPTLEPHEV FVELDDGQRF
NIKHNIAHDE RLAQRHVVNI YIGDEHGPVT TPLQVTQVAL DAIASADVIV FGPGSLYESI
LPNLLIPDLR DAIRRSKACK IYICSLMTEP GMTTGYSVGD HVRQIVRFGG FTPDYVLVNA
PRIDAEVRRI YAAAGQMPVF LTPEEYEETA VSTTDRLTTR DILIEGAKVI EADLATAVVQ
LTASLDHPGE GRTVRVLRHD PEKLATAIME VWKRQ