| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2328 |
|---|
| Symbol | |
|---|
| ID | 5209295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2880889 |
|---|
| End bp | 2881323 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640595933 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001276657 |
|---|
| Protein GI | 148656452 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2402] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGT ATCTGATTGA TACGAACATC TGGCTTGAGC GCCTCCTGGA TCAGGATCGA
TCCGCTGAGG TACAGCGTTT GCTCGCTGCG CTGCCGTCTC GTCATCTGGC GCTATCCCAT
TTCTCGCTCC ACTCTATCAG CGTCATTCTG GGTCGGTACC GGCGACCTGA CGCCCTGATA
CAGTTCATCG ACGACCTGTT CATCACCGGC GATGTCCACC TGGTGACTGT GCCGCCAGAG
TCGTTTGGCC GCATTGTCGA CGCAATGACC AGCCACCATC TTGATTTTGA CGATGCCTAT
CAATACGTTG CGACCCGTCT GATCAGTGGC GAACTGGTCA GTTTCGACGC CGATTTTGAT
CGCTCCGATC TTCGGCGGCT GACGCCAGCG ACGGTGTTCG CGCGTCTGAC GGCGTCCGAC
ACACCGCCTG CATAG
|
|---|
| Protein sequence | MTMYLIDTNI WLERLLDQDR SAEVQRLLAA LPSRHLALSH FSLHSISVIL GRYRRPDALI
QFIDDLFITG DVHLVTVPPE SFGRIVDAMT SHHLDFDDAY QYVATRLISG ELVSFDADFD
RSDLRRLTPA TVFARLTASD TPPA
|
|---|
| |