| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2289 |
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| Symbol | |
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| ID | 5209256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2827118 |
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| End bp | 2827873 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640595894 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001276618 |
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| Protein GI | 148656413 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.878077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGTG ATGAATTGCG GGATCAGGTT GCACTCGTAA CCGGTGCATC GCGGGGGATA
GGGCGGGCGA TTGCGCTGGC GATCGCGGCG CGTGGCGGTC GCGTTCTCGT CAACTATCAG
CGCAATGCCG CCGCCGCCGT GGAGGTCGTT GATGAGATTG CAGCAATGGG CAGCGAGGCG
CTGGCGTTTG CCGCCGATGT GGCCGACGAG CCGGCCGTTA ACGCAATGGT CGCGGCGTGC
CTCGACCGCT GGAACCGACT CGATGCGCTG GTCAACAACG CCGGTCTGAC CGACGATGCA
CCGTTTGTGC GCATGCGTTT TGATCAGTGG CGATCGGTCA TCGATGCCGA TCTGACCGGT
GCGTTTTTGT GTAGCCGTGC CGTGCTGGCG CCAATGCGCG CGCGCGGTTA CGGGCGTATT
GTGATGATCG GGTCGCTGGC AGGTCTGGCA GGGAATGTTG GTCAGGCAAA TTATGCTGCT
GCCAAGGCCG GGCTGGTTGG TCTCGCACGT TCACTGGCGC GTGAGACGGC GCGCGACGGT
ATTACGGTCA ATGTGGTGGC GCCGGGGTAC ATCGAGACCG ACCTGTTGGC AGCGTTGCCG
CAAGCACGGC GACAGTGGGC GCTCGATGCC ATTGCAATGG GACGTTTCGG TACGCCGGAA
GAGGTTGCGG CAGCTGTTGT TTTTCTGATC TCGCCGGCTG CATCGTACAT CACCGGTCAG
GTGCTGGCGA TCGATGGCGG TTGGGTCATG CCATAG
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| Protein sequence | MIGDELRDQV ALVTGASRGI GRAIALAIAA RGGRVLVNYQ RNAAAAVEVV DEIAAMGSEA
LAFAADVADE PAVNAMVAAC LDRWNRLDAL VNNAGLTDDA PFVRMRFDQW RSVIDADLTG
AFLCSRAVLA PMRARGYGRI VMIGSLAGLA GNVGQANYAA AKAGLVGLAR SLARETARDG
ITVNVVAPGY IETDLLAALP QARRQWALDA IAMGRFGTPE EVAAAVVFLI SPAASYITGQ
VLAIDGGWVM P
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