| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2264 |
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| Symbol | |
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| ID | 5209227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2790746 |
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| End bp | 2792671 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640595865 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001276593 |
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| Protein GI | 148656388 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG CCGAACGTAC CGCTGGAACC GTCAGTATAC CCGTCGTCAA TGTGCGCCCC
GGTTGGGCGG GGTGGCTCAG TACGACCGAT CATAAGCGCA TTGGGATCAT GTATCTGGTT
AGCGCGTTCG TCTTTTTCCT GATCGGGGGG ATCGAGGCGC TGCTCATGCG CATTCAACTC
GGTGTGCCGG ATAACACGTT CCTGACGCCC GATGTCTATA ATCAGATGTT CACCATGCAC
GGCACAACGA TGATCTTCCT CGGTCTGATG CCGCTGAACG TCGGGCTGGG CAACTATATG
GTGCCGCTGA TGATCGGCGC GCGCGATATG GCATTTCCGC GTCTCAACGC GCTCAGTATC
TGGCTGTTCA TCTTCGGCGG CTTGATGCTG TACGTCAGTT TCTTTGTCGG GGGCGCGCCG
AATGTCGGCT GGTTCGCCTA TGCGCCCCTG ACGCAGAAAC AGTTTGCACC GACTGCTGGT
GTCGATTACT GGATCGTCGG TATTGGTCTG ACCGGCGTGG CATCGATTGC GGGTGCGTTG
AACTTTATCG TCACCATCCT CAATATGCGC GCGCCCGGTA TGACCCTCAA CCGGATGCCG
CTGTTCGTCT GGATGCAGCT GGTGGTTGCG TTCATTCTGA TCTTCGCCTT CCCCGTGTTG
ACGGTGGCGA CCATCCAGTT GCTGTTCGAC CGGCACTTCG GTACGCGCTT CTTCCTGCCG
AACCTGGGTG GTGATGCGGT GCTCTGGCAG CACCTCTTCT GGTTCTTCGG TCACCCCGAA
GTCTACATTC TCATCCTGCC AACGATGGGC ATCATTTCGG AAGTGTTGCC GACCTTTTCA
CGCAAGCCGA TCTTCGGGTA TGCGTTTGTG GCATACTCTG GGGTGGCAAT TGGCTTCCTC
GGCTTTCTGG TCTGGGCGCA CCATATGTTC GCCGTGGGTC TCGGTCCGCT GGCGAATGCG
TTCTTCGGCG CCGCCAGCTT TCTGATCGCA GTCCCGACCG GCGTGAAGAT CTTCAACTGG
CTGGCGACGA TGTGGCAGGG TTCGCTGAAC CTGACCACGT CGATGCTCTA TGCCATCGGC
TTTATCAGTA TGTTCATTAT CGGCGGTATC AGTGGCGTTA CCCTGGCTTC GCCACCGATC
AATGTGCAGC AGACCGACTC CTACTACGTT GTCGCCCATA TGCACTATGT GCTGTTTGGC
GGTGCGATCC AGGGCATTTT CGCGGGAATC TTTTACTGGT TCCCGAAGAT GACCGGGCGG
ATGCTGGACG AACGACTCGG CAAATGGCAG TTCTGGCTTA TGCTGATCAG TTTCAACCTG
ACCTTCTTCC CCATGCACCT GAGCGGCAAT GCTGGTATGC CGCGACGTAT CTATACCTAC
GAAGCGGACA TGGGGTGGAA TCTCTGGAAC CTGATTTCCA CAACCGGCTC ACTGCTACTG
GCGGTCGCTT TCCTGCTGTT CCTCTGGAAT GTGGTAACGA GTATACGGCG CGGTCCCATT
GCGCCTGCCG ATCCGTGGGA TGGCGCGACG CTGGAGTGGG CGGTCAGTTC GCCGCCGCCG
GTCTACAACT TTGCCGTAAC GCCGCGCGTG CGCAGTCGTC GTCCACTGTG GGATCAGAAG
TATCCCCATC TGCACGAGAT CAACGGCGGG CACGGGACGT CTAGCGCACA CGGTGAGTCG
GAGAGGCGTG ATGGATTTGA GCATGAAACG TCTCCCGCCA TAGAACCGAT CCATCTGCCT
TCGCCAACCT ATGCGCCGCT CATTGTGTCG GTCGGTATTA TGATCCTGGG CTTCGGCATC
ATATATCTGA GTGACTTTGG TCTCATCGCA GCGTCAGCGA TGATCGTCGG TTTGCTGATC
ATGGCGTTCG GCATTCTCAG TTGGGTGCGC ATCTCGCATG TGGACTCGCC GCACCATGCG
CACTAG
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| Protein sequence | MAIAERTAGT VSIPVVNVRP GWAGWLSTTD HKRIGIMYLV SAFVFFLIGG IEALLMRIQL
GVPDNTFLTP DVYNQMFTMH GTTMIFLGLM PLNVGLGNYM VPLMIGARDM AFPRLNALSI
WLFIFGGLML YVSFFVGGAP NVGWFAYAPL TQKQFAPTAG VDYWIVGIGL TGVASIAGAL
NFIVTILNMR APGMTLNRMP LFVWMQLVVA FILIFAFPVL TVATIQLLFD RHFGTRFFLP
NLGGDAVLWQ HLFWFFGHPE VYILILPTMG IISEVLPTFS RKPIFGYAFV AYSGVAIGFL
GFLVWAHHMF AVGLGPLANA FFGAASFLIA VPTGVKIFNW LATMWQGSLN LTTSMLYAIG
FISMFIIGGI SGVTLASPPI NVQQTDSYYV VAHMHYVLFG GAIQGIFAGI FYWFPKMTGR
MLDERLGKWQ FWLMLISFNL TFFPMHLSGN AGMPRRIYTY EADMGWNLWN LISTTGSLLL
AVAFLLFLWN VVTSIRRGPI APADPWDGAT LEWAVSSPPP VYNFAVTPRV RSRRPLWDQK
YPHLHEINGG HGTSSAHGES ERRDGFEHET SPAIEPIHLP SPTYAPLIVS VGIMILGFGI
IYLSDFGLIA ASAMIVGLLI MAFGILSWVR ISHVDSPHHA H
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